Gene omics information

Query gene ID	1611218_at
Gene name	hypothetical LOC100261590
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	92.3	1611218_at	CB912267	hypothetical LOC100261590	-	3e-1	At1g66360	C2 domain-containing protein	S.X.	H.G.	Please select
0.50	72.7	1611997_at	CA812801	hypothetical protein LOC100249691	-	4e-2	At5g55660	-	S.X.	H.G.	Please select
0.40	57.7	1612900_at	CD797784	hypothetical protein LOC100259949	-	5e+0	At5g44585	unknown protein	S.X.	H.G.	Please select
0.19	20.9	1618098_at	CB979528	hypothetical protein LOC100244989	-	8e-1	At5g63135	unknown protein	S.X.	H.G.	Please select
0.17	18.2	1619095_s_at	CB341757	hypothetical protein LOC100257742	-	8e-8	At5g63280	zinc finger (C2H2 type) family protein	S.X.	H.G.	Please select
0.17	18.2	1612717_s_at	CA814430	hypothetical protein LOC100259033	-	1e+0	At1g01225	NC domain-containing protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.3	98.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
4.7	97.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
4.4	97.3	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
4.0	96.7	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
3.8	96.4	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.7	96.2	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
3.4	95.5	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
3.4	95.5	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.3	95.2	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
3.2	94.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.28	6e-9	59	1617532_at	CF511414	hypothetical protein LOC100256945	-	3e-10	At1g02080	transcriptional regulator-related	C.G.	S.X.	Please select
0.03	1e+0	32	1618563_at	CA817076	hypothetical protein LOC100267134	-	3e-7	At2g41040	methyltransferase-related	C.G.	S.X.	Please select
0.03	1e+0	32	1618037_at	CB911958	-	-	3e-1	At3g01650	RGLG1 (RING domain Ligase1)	C.G.	S.X.	Please select
0.02	1e+0	32	1613550_at	CF519120	hypothetical protein LOC100255002	-	1e-1	At5g19240	unknown protein	C.G.	S.X.	Please select
0.02	5e+0	30	1622088_at	CD720317	-	-	3e-1	At2g21370	xylulose kinase, putative	C.G.	S.X.	Please select
0.02	5e+0	30	1619742_at	AF265562.1	MAD-box transcripion factor	-	2e-16	At3g58780	SHP1 (SHATTERPROOF 1)	C.G.	S.X.	Please select
0.02	5e+0	30	1618805_at	CB837735	-	-	6e+0	At4g33720	pathogenesis-related protein, putative	C.G.	S.X.	Please select
0.02	5e+0	30	1618293_at	CD720317	-	-	3e-1	At2g21370	xylulose kinase, putative	C.G.	S.X.	Please select
0.03	5e+0	30	1618069_at	CD720173	-	-	6e+0	At3g55254	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-1	36	Arabidopsis thaliana	At1g66360	842954	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.28	6e-40	165	Glycine max	GmaAffx.44143.1.S1_at	BU547730	-	-	2e-16	At1g02080	transcriptional regulator-related	C.G.	S.X.	Please select
0.09	1e-7	56	Hordeum vulgare	Contig9348_at	Contig9348	-	-	2e-5	At1g02080	transcriptional regulator-related	C.G.	S.X.	Please select
0.04	9e+0	32	Oryza sativa	OsAffx.576.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.33	4e-47	188	Populus trichocarpa	PtpAffx.11426.1.A1_at	CV263606	hypothetical protein	-	9e-15	At1g02080	transcriptional regulator-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	2e-2	40	Triticum aestivum	Ta.5541.3.S1_at	BJ242729	-	-	4e+0	At4g27530	unknown protein	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	ZmAffx.54.1.A1_at	AI665038	-	-	5e-2	At3g20610	non-race specific disease resistance protein, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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