Gene omics information

Query gene ID	1611182_at
Gene name	hypothetical protein LOC100267624
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	79.8	1611182_at	CF512709	hypothetical protein LOC100267624	-	2e-20	At3g03930	protein kinase-related	S.X.	H.G.	Please select
0.64	84.7	1620666_at	CB346885	hypothetical protein LOC100257000	-	2e-12	At2g31510	IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7)	S.X.	H.G.	Please select
0.53	75.2	1622573_at	CF214631	hypothetical protein LOC100266218	-	4e-1	Atcg00070	-	S.X.	H.G.	Please select
0.52	73.9	1607761_at	CB974335	hypothetical protein LOC100247652	-	9e-5	At1g56460	PAPA-1-like family protein / zinc finger (HIT type) family protein	S.X.	H.G.	Please select
0.50	72.7	1611219_s_at	CB977634	aspartic proteinase	-	2e-34	At1g11910	aspartyl protease family protein	S.X.	H.G.	Please select
0.44	64.1	1619759_at	CA814682	hypothetical protein LOC100253701	-	5e-29	At2g41530	SFGH (S-FORMYLGLUTATHIONE HYDROLASE)	S.X.	H.G.	Please select
0.40	57.7	1610373_at	CF517404	hypothetical protein LOC100242638	-	1e-20	At2g26210	ankyrin repeat family protein	S.X.	H.G.	Please select
0.32	43.1	1611403_at	CF403231	hypothetical protein LOC100241204	-	2e+0	At4g22310	unknown protein	S.X.	H.G.	Please select
0.31	41.3	1614009_at	BQ797920	hypothetical protein LOC100242045	-	4e-19	At1g14000	VIK (VH1-INTERACTING KINASE)	S.X.	H.G.	Please select
0.29	37.7	1612909_at	CF404929	hypothetical protein LOC100264659	-	3e-8	At3g28970	AAR3 (antiauxin-resistant 3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.3	95.2	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287886	Green soft berry C22 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287884	Green soft berry C7 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM287879	Green hard berry C19 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-2	38	1622546_at	CB968779	-	-	3e-17	At5g20840	phosphoinositide phosphatase family protein	C.G.	S.X.	Please select
0.02	1e+0	32	1620567_at	BQ792636	hypothetical protein LOC100242364	-	3e-154	At4g31990	ASP5 (ASPARTATE AMINOTRANSFERASE 5)	C.G.	S.X.	Please select
0.03	1e+0	32	1619824_at	CB007139	-	-	3e-1	At4g10100	CNX7	C.G.	S.X.	Please select
0.03	1e+0	32	1616056_at	CB007139	hypothetical protein LOC100246543	-	3e-1	At4g10100	CNX7	C.G.	S.X.	Please select
0.02	5e+0	30	1620136_at	CB035815	hypothetical LOC100251752	-	8e-6	At4g15960	catalytic/ epoxide hydrolase	C.G.	S.X.	Please select
0.03	5e+0	30	1618979_at	CB972606	-	-	1e+0	At1g19120	small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative	C.G.	S.X.	Please select
0.04	5e+0	30	1618791_at	CF210682	hypothetical protein LOC100246716	-	3e-1	At3g51400	unknown protein	C.G.	S.X.	Please select
0.03	5e+0	30	1616611_at	CF404283	-	-	2e-1	At2g33220	-	C.G.	S.X.	Please select
0.02	5e+0	30	1616329_at	CB035815	-	-	8e-6	At4g15960	catalytic/ epoxide hydrolase	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.28	2e-20	99	Arabidopsis thaliana	At3g03930	820302	protein kinase-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.49	8e-70	264	Glycine max	GmaAffx.56354.2.S1_at	BI426749	-	-	2e-21	At3g03930	protein kinase-related	C.G.	S.X.	Please select
0.34	4e-32	137	Hordeum vulgare	Contig7579_at	Contig7579	-	-	1e-57	At3g03940	protein kinase family protein	C.G.	S.X.	Please select
0.21	6e-53	208	Oryza sativa	Os03g0793500	AK121620.1	-	Casein kinase-like protein	4e-38	At3g03940	protein kinase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.62	3e-106	385	Populus trichocarpa	Ptp.5140.1.S1_s_at	BU822372	hypothetical protein	-	2e-117	At5g18190	protein kinase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.26	3e-25	115	Triticum aestivum	Ta.22269.1.A1_a_at	CA734944	-	-	2e-42	At3g03940	protein kinase family protein	C.G.	S.X.	Please select
0.20	6e-31	133	Zea mays	Zm.6736.2.A1_at	AY106527.1	ATP binding protein	-	2e-35	At3g03940	protein kinase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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