Gene omics information

Query gene ID	1611052_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.99	100.0	1611052_at	CD718520	-	-	4e-7	At5g12030	AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)	S.X.	H.G.	Please select
0.39	54.9	1610622_at	CD799955	hypothetical protein LOC100244354	-	2e-1	At4g19150	ankyrin repeat family protein	S.X.	H.G.	Please select
0.34	46.8	1618975_at	CD006441	-	-	4e-4	At1g55680	WD-40 repeat family protein	S.X.	H.G.	Please select
0.29	37.7	1614128_at	CB916225	similar to ubiquitin carrier protein	-	5e-82	At1g14400	UBC1 (UBIQUITIN CARRIER PROTEIN 1)	S.X.	H.G.	Please select
0.28	37.7	1612786_at	CB977888	hypothetical protein LOC100252486	-	5e-7	At5g11490	adaptin family protein	S.X.	H.G.	Please select
0.26	32.0	1612768_at	CF403786	hypothetical protein LOC100244114	-	1e+0	At4g19100	unknown protein	S.X.	H.G.	Please select
0.26	32.0	1619876_at	AF176496.1	-	-	7e-13	At1g09640	elongation factor 1B-gamma, putative / eEF-1B gamma, putative	S.X.	H.G.	Please select
0.25	30.5	1611655_at	CB913871	-	-	3e-32	At2g16860	GCIP-interacting family protein	S.X.	H.G.	Please select
0.23	27.5	1610301_at	CD717279	-	-	3e-1	At1g67590	remorin family protein	S.X.	H.G.	Please select
0.23	27.5	1613291_at	CF972323.1	-	-	4e-4	At3g13410	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
24.5	100.0	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
9.4	99.6	GSM436357	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
6.7	99.0	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.3	97.2	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436387	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.8	96.4	GSM436405	V. riparia (VR, PI588259) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.7	96.2	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.7	96.2	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.2	94.9	GSM436422	V. riparia (VR, PI588259) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.72	0	640	1610032_at	CF405330	hypothetical protein LOC100266315	-	1e-4	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.54	3e-162	569	1611192_at	CB348409	hypothetical protein LOC100268056	-	5e-10	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.59	1e-155	547	1608164_at	CD008061	hypothetical protein LOC100261109	-	3e-4	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.40	1e-143	508	1622173_at	CD719685	-	-	3e-6	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.40	1e-143	508	1618391_at	CD719685	-	-	3e-6	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.44	9e-138	488	1614330_at	CB343702	hypothetical protein LOC100243983	-	3e-5	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.06	7e-3	40	1615612_at	CB919542	similar to cytosolic class II small heat-shock protein HSP17.5	-	2e-2	At3g03490	PEX19-1 (peroxin 19-1)	C.G.	S.X.	Please select
0.02	2e+0	32	1613797_at	CD797311	hypothetical LOC100254751 /// hypothetical LOC100256339	-	3e-168	Atmg00160	-	C.G.	S.X.	Please select
0.02	2e+0	32	1611976_at	CF213700	hypothetical protein LOC100260879	-	4e-1	At2g20362	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	4e-7	56	Arabidopsis thaliana	At5g12030	831076	AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)	Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.20	6e-16	85	Glycine max	Gma.7766.1.S1_at	BU550058	-	-	6e-3	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.19	5e-11	67	Hordeum vulgare	Contig3289_at	Contig3289	-	-	1e-1	At2g24762	AtGDU4 (Arabidopsis thaliana GLUTAMINE DUMPER 4)	C.G.	S.X.	Please select
0.17	5e-14	79	Oryza sativa	Os01g0184100	AK071240.1	-	17.5 kDa class II heat shock protein	4e-1	At5g22270	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.29	3e-42	173	Populus trichocarpa	PtpAffx.491.1.S1_s_at	CV246284	hypothetical protein	-	2e-6	At5g12030	AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.15	7e-12	71	Triticum aestivum	TaAffx.70660.1.S1_at	BQ802102	-	-	6e+0	At3g15780	unknown protein	C.G.	S.X.	Please select
0.22	1e-8	59	Zea mays	ZmAffx.903.1.A1_at	AI770912	-	-	1e+1	At3g42310	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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