CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1611002_s_at

Gene name hypothetical protein LOC100246998

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 79.8 1611002_s_at CB969717 hypothetical protein LOC100246998 - 6e-13 At3g10210 - S.X. H.G.
0.64 84.7 1607202_s_at CD797631 hypothetical protein LOC100242295 - 2e-65 At5g23090 NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13) S.X. H.G.
0.59 80.6 1613281_at CF513460 hypothetical protein LOC100249314 - 4e-33 At3g22440 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.56 79.4 1616182_at CB978298 hypothetical protein LOC100242352 - 1e-16 At1g14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein S.X. H.G.
0.53 75.2 1607823_s_at CF405744 hypothetical protein LOC100263158 - 1e+0 At5g59000 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.50 72.7 1614665_s_at BQ799768 similar to Tubby; Cyclin-like F-box - 5e-16 At1g53320 AtTLP7 (TUBBY LIKE PROTEIN 7) S.X. H.G.
0.48 68.8 1611180_at BQ795485 hypothetical protein LOC100263350 - 5e+0 At3g28455 CLE25 (CLAVATA3/ESR-RELATED 25) S.X. H.G.
0.46 66.5 1613129_at CB970410 hypothetical protein LOC100266068 - 2e-13 At4g17330 ATG2484-1 S.X. H.G.
0.32 43.1 1615901_at CF405787 hypothetical protein LOC100248277 - 5e+0 At4g13075 RALFL30 (RALF-LIKE 30) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.8 96.4 GSM436405 V. riparia (VR, PI588259) LD, 15h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436404 V. riparia (VR, PI588259) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436401 V. riparia (VR, PI588259) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436418 V. riparia (VR, PI588259) SD, 13h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.8 93.4 GSM436400 V. riparia (VR, PI588259) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.7 93.0 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436419 V. riparia (VR, PI588259) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436423 V. riparia (VR, PI588259) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436412 V. riparia (VR, PI588259) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436408 V. riparia (VR, PI588259) LD, 15h 42 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.76 0 1287 1610318_at CF206018.1 - - 7e-15 At3g10210 - C.G. S.X.
0.02 6e-1 34 1622753_at CB982946 - - 3e-33 At1g27970 NTF2B (NUCLEAR TRANSPORT FACTOR 2B) C.G. S.X.
0.02 6e-1 34 1621953_s_at CB982946 hypothetical protein LOC100252245 - 3e-33 At1g27970 NTF2B (NUCLEAR TRANSPORT FACTOR 2B) C.G. S.X.
0.02 6e-1 34 1614212_at CA811148 hypothetical protein LOC100250620 - 4e-5 At4g35750 Rho-GTPase-activating protein-related C.G. S.X.
0.01 2e+0 32 1620276_at CF605672 hypothetical protein LOC100253741 - 9e-6 At2g41380 embryo-abundant protein-related C.G. S.X.
0.02 2e+0 32 1620018_at CF203824.1 - - 2e+0 At5g44568 unknown protein C.G. S.X.
0.02 2e+0 32 1618591_at CD006326 hypothetical protein LOC100248528 - 6e-6 At1g74600 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.02 2e+0 32 1614781_at CD006326 - - 6e-6 At1g74600 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.02 2e+0 32 1613873_at CF518926 hypothetical protein LOC100241173 - 5e-20 At1g52320 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 6e-13 75 Arabidopsis thaliana At3g10210 820183 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO - - - C.G. S.X.
0.28 1e-24 115 Glycine max GmaAffx.82.1.S1_at CD415578 - - 9e-8 At3g10210 - C.G. S.X.
0.10 2e-5 50 Hordeum vulgare Contig13125_at Contig13125 - - 8e+0 At5g06270 unknown protein C.G. S.X.
0.07 3e-1 38 Oryza sativa Os01g0948300 AK102153.1 - Cellular retinaldehyde-binding)/triple function,C-terminal domain containing protein 9e+0 At3g30370 - C.G. S.X.
0.38 7e-72 272 Populus trichocarpa Ptp.3646.1.S1_s_at CV267919 hypothetical protein - 4e-14 At3g10210 - C.G. S.X.
0.10 9e-3 42 Triticum aestivum Ta.8336.1.S1_at BQ161756 - - 8e+0 At5g06270 unknown protein C.G. S.X.
0.07 2e-4 46 Zea mays Zm.7535.1.A1_at AY105427.1 cellular retinaldehyde-binding/triple function, C-terminal - 8e+0 At5g03204 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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