Gene omics information

Query gene ID	1610957_at
Gene name	hypothetical protein LOC100241474
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1610957_at	CF207187	hypothetical protein LOC100241474	-	4e+0	At4g09320	NDPK1	S.X.	H.G.	Please select
0.70	88.6	1610891_x_at	CF201787.1	-	-	8e-1	At4g34760	auxin-responsive family protein	S.X.	H.G.	Please select
0.59	80.6	1608397_at	CB971352	hypothetical protein LOC100250547	-	4e+0	At3g26420	ATRZ-1A	S.X.	H.G.	Please select
0.57	79.8	1606598_at	CF202489.1	-	-	5e-6	At4g15545	unknown protein	S.X.	H.G.	Please select
0.53	75.2	1618899_at	CF206580.1	-	-	7e-18	At5g57040	lactoylglutathione lyase family protein / glyoxalase I family protein	S.X.	H.G.	Please select
0.44	64.1	1613602_at	CF513870	hypothetical LOC100254354	-	8e+0	At5g02470	DPA	S.X.	H.G.	Please select
0.43	61.5	1621847_at	CF202726.1	hypothetical protein LOC100267426	-	4e+0	At4g17310	unknown protein	S.X.	H.G.	Please select
0.40	57.7	1614812_s_at	CF372270	hypothetical protein LOC100265283	-	2e-27	At3g02580	STE1 (STEROL 1)	S.X.	H.G.	Please select
0.38	53.6	1606916_at	CF202248.1	-	-	1e-1	At3g10640	VPS60.1	S.X.	H.G.	Please select
0.35	48.5	1616093_at	CF404665	similar to pectin methylesterase 1	-	6e-2	At4g33220	enzyme inhibitor/ pectinesterase	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
14.7	99.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
9.3	99.6	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
7.2	99.1	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
6.8	99.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
6.8	99.0	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
6.7	99.0	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
6.7	99.0	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
5.7	98.5	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
5.4	98.3	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
5.3	98.2	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-2	38	1616520_at	CF214084	hypothetical protein LOC100258184	-	2e-37	At4g09320	NDPK1	C.G.	S.X.	Please select
0.03	3e-1	34	1615069_at	CA815055	hypothetical protein LOC100257375	-	5e-44	At1g06690	aldo/keto reductase family protein	C.G.	S.X.	Please select
0.01	1e+0	32	1611279_s_at	CB343789	-	-	0	Atcg01010	-	C.G.	S.X.	Please select
0.02	1e+0	32	1610421_at	CF212555	hypothetical protein LOC100258884	-	4e-48	At5g54680	ILR3 (iaa-leucine resistant3)	C.G.	S.X.	Please select
0.02	4e+0	30	1622748_at	CB003967	-	-	2e+0	At5g28630	glycine-rich protein	C.G.	S.X.	Please select
0.02	4e+0	30	1621588_at	CB982967	hypothetical protein LOC100259735	-	6e-16	At2g33470	GLTP1 (glycolipid transfer protein 1)	C.G.	S.X.	Please select
0.03	4e+0	30	1617291_s_at	CB914455	similar to putative 60S ribosomal protein L39	-	3e-17	At4g31985	60S ribosomal protein L39 (RPL39C)	C.G.	S.X.	Please select
0.04	4e+0	30	1615567_at	CF204127.1	-	-	2e-10	At3g02190	60S ribosomal protein L39 (RPL39B)	C.G.	S.X.	Please select
0.03	4e+0	30	1612916_at	CB343914	-	-	9e-2	At5g65720	NFS1	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e+0	32	Arabidopsis thaliana	At4g09320	826515	NDPK1	nucleoside diphosphate kinase type 1 (NDPK1) gene, complete	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e+0	32	Glycine max	GmaAffx.39505.1.S1_at	AW734714	-	-	2e+0	Atcg01100	-	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	Contig26422_at	Contig26422	-	-	4e-16	At5g13550	SULTR4	C.G.	S.X.	Please select
0.06	1e-1	38	Oryza sativa	Os04g0425000	9632.m03337	-	-	5e+0	At4g18205	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	5e+0	32	Populus trichocarpa	PtpAffx.53466.1.S1_at	DN487053	-	-	8e-2	At4g25170	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e+0	32	Triticum aestivum	TaAffx.87108.1.S1_at	CA595621	-	-	4e+0	At5g06650	GIS2 (GLABROUS INFLORESCENCE STEMS 2)	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.3169.3.S1_x_at	CF628824	60S ribosomal protein L33-B	-	2e-9	At1g74270	60S ribosomal protein L35a (RPL35aC)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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