CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1610952_at

Gene name hypothetical protein LOC100256999

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 90.8 1610952_at BQ796872 hypothetical protein LOC100256999 - 4e+0 At3g17680 - S.X. H.G.
0.50 72.7 1619722_at CF213692 hypothetical protein LOC100246022 - 7e-26 At5g19010 MPK16 S.X. H.G.
0.40 57.7 1607144_at CB971726 similar to plasma membrane H+ ATPase - 1e-175 At3g47950 AHA4 S.X. H.G.
0.36 50.7 1617746_at CF214456 hypothetical protein LOC100248500 - 0 At5g17920 ATMS1 S.X. H.G.
0.21 24.0 1619274_at CD718648 similar to BY-2 kinesin-like protein 10 - 3e-1 At3g17152 enzyme inhibitor/ pectinesterase S.X. H.G.
0.17 18.2 1613630_s_at BQ794547 similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding - 0 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.5 97.5 GSM147732 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 61
3.5 95.7 GSM436358 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
3.0 94.2 GSM436362 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM147714 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 43
2.8 93.4 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
2.6 92.5 GSM147738 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 67
2.5 91.9 GSM436373 Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
2.5 91.9 GSM436360 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 32 1621460_at CF204510.1 - - 6e-6 At4g33250 EIF3K (EUKARYOTIC TRANSLATION INITIATION FACTOR 3K) C.G. S.X.
0.03 1e+0 32 1621028_at CB970385 hypothetical protein LOC100266780 - 4e-9 At2g35790 unknown protein C.G. S.X.
0.03 1e+0 32 1620682_at CA814199 hypothetical protein LOC100255065 - 2e-6 At1g26800 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 1e+0 32 1619642_at CF512453 hypothetical protein LOC100241575 - 3e-28 At3g10340 PAL4 (Phenylalanine ammonia-lyase 4) C.G. S.X.
0.02 1e+0 32 1616451_at CA817273 hypothetical protein LOC100259495 - 5e-38 At4g33250 EIF3K (EUKARYOTIC TRANSLATION INITIATION FACTOR 3K) C.G. S.X.
0.02 1e+0 32 1610278_s_at CA817273 hypothetical protein LOC100259495 - 5e-38 At4g33250 EIF3K (EUKARYOTIC TRANSLATION INITIATION FACTOR 3K) C.G. S.X.
0.02 5e+0 30 1621106_at CB974327 - - 2e-44 At4g35335 nucleotide-sugar transmembrane transporter/ sugar:hydrogen symporter C.G. S.X.
0.02 5e+0 30 1618360_at CF204032.1 - - 5e-13 At2g32080 PUR ALPHA-1 C.G. S.X.
0.03 5e+0 30 1616742_s_at CF212339 hypothetical protein LOC100250345 - 4e+0 At5g37290 armadillo/beta-catenin repeat family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e+0 32 Arabidopsis thaliana At3g17680 821035 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBF - - - C.G. S.X.
0.08 3e-5 50 Glycine max GmaAffx.73721.2.S1_at BF423600 - - 1e+0 At2g39960 microsomal signal peptidase 25 kDa subunit, putative (SPC25) C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HVSMEf0013D07r2_at HVSMEf0013D07r2 - - 7e-1 At3g46680 UDP-glucoronosyl/UDP-glucosyl transferase family protein C.G. S.X.
0.04 2e+0 34 Oryza sativa Os.16254.1.S1_at - - - 0 C.G. S.X.
0.09 2e-6 54 Populus trichocarpa PtpAffx.66809.2.A1_at BP936429 hypothetical protein - 4e+0 At5g41992 CPuORF58 (Conserved peptide upstream open reading frame 58) C.G. S.X.
0.04 3e-1 36 Triticum aestivum Ta.15580.1.S1_at CA485598 - - 2e-1 At2g18400 ribosomal protein L6 family protein C.G. S.X.
0.03 8e+0 30 Zea mays Zm.9593.1.A1_at BM332041 - - 1e+0 At4g05170 DNA binding / transcription factor C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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