Gene omics information

Query gene ID	1610936_at
Gene name	hypothetical protein LOC100259946
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1610936_at	CB972355	hypothetical protein LOC100259946	-	2e-1	At3g14870	unknown protein	S.X.	H.G.	Please select
0.44	64.1	1610370_s_at	CB975555	hypothetical protein LOC100243953	-	1e+0	At5g22430	unknown protein	S.X.	H.G.	Please select
0.33	45.7	1609022_at	CF371738	hypothetical protein LOC100250008	-	1e+0	At4g13690	unknown protein	S.X.	H.G.	Please select
0.31	41.3	1620155_at	CB969445	hypothetical protein LOC100242363	-	1e+0	At3g56970	BHLH038	S.X.	H.G.	Please select
0.31	41.3	1617350_at	CB975555	hypothetical protein LOC100243953	-	1e+0	At5g22430	unknown protein	S.X.	H.G.	Please select
0.11	11.3	1608286_at	CD797963	hypothetical protein LOC100253910	-	1e+0	At2g32050	cell cycle control protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.9	97.9	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.4	97.3	GSM436397	V. riparia (VR, PI588259) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.4	97.3	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.3	97.2	GSM436415	V. riparia (VR, PI588259) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.2	97.1	GSM436412	V. riparia (VR, PI588259) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.2	97.1	GSM436416	V. riparia (VR, PI588259) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.1	96.9	GSM436399	V. riparia (VR, PI588259) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436403	V. riparia (VR, PI588259) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.8	96.4	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.7	96.2	GSM436395	V. riparia (VR, PI588259) LD, 15h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e-2	40	1616137_at	CF512936	hypothetical protein LOC100241403	-	2e-1	At4g24250	MLO13 (MILDEW RESISTANCE LOCUS O 13)	C.G.	S.X.	Please select
0.02	2e-1	36	1617621_at	CF208003	-	-	2e+0	At2g02520	-	C.G.	S.X.	Please select
0.01	2e-1	36	1607814_at	CB346232	hypothetical protein LOC100256691	-	4e-45	At4g37080	unknown protein	C.G.	S.X.	Please select
0.02	7e-1	34	1622616_at	CB006094	-	-	4e-1	At5g42080	ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN)	C.G.	S.X.	Please select
0.02	7e-1	34	1621358_at	CD008565	-	-	2e-2	At5g52330	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	C.G.	S.X.	Please select
0.02	7e-1	34	1619403_at	CF211963	hypothetical protein LOC100263522	-	1e+0	At3g52400	SYP122 (SYNTAXIN OF PLANTS 122)	C.G.	S.X.	Please select
0.02	7e-1	34	1615229_at	CD713070	-	-	3e-1	At2g30050	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.02	7e-1	34	1611441_at	CD713070	-	-	3e-1	At2g30050	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.02	7e-1	34	1610031_at	CB972205	-	-	4e+0	At1g27385	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-1	38	Arabidopsis thaliana	At3g14870	820716	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;POMAFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	4e-6	54	Glycine max	GmaAffx.27937.1.S1_at	BI971268	-	-	1e+0	At4g15680	glutaredoxin family protein	C.G.	S.X.	Please select
0.03	3e-1	36	Hordeum vulgare	HW05D06V_at	HW05D06V	-	-	1e+0	At3g55420	unknown protein	C.G.	S.X.	Please select
0.04	2e-2	42	Oryza sativa	Os01g0203800	AK100265.1	-	Plant protein of unknown function DUF641 domaincontaining protein	7e-2	At3g62600	ATERDJ3B	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e-10	67	Populus trichocarpa	PtpAffx.203814.1.S1_x_at	pmrna7537	hypothetical protein	-	2e-1	At1g05970	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e-2	42	Triticum aestivum	Ta.3444.1.S1_at	BJ251316	-	-	5e-1	At4g26965	NADH:ubiquinone oxidoreductase family protein	C.G.	S.X.	Please select
0.02	4e+0	32	Zea mays	ZmAffx.1497.1.S1_at	40794996-114	-	-	0	Atmg00110	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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