CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1610831_at

Gene name hypothetical protein LOC100255257

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1610831_at CB976031 hypothetical protein LOC100255257 - 4e-89 At3g03380 DegP7 (DegP protease 7) S.X. H.G.
0.56 79.4 1608835_a_at CF518085 - - 6e+0 At1g56280 ATDI19 S.X. H.G.
0.40 57.7 1611478_at BQ798642 hypothetical protein LOC100263853 - 5e-63 At1g56450 PBG1 S.X. H.G.
0.40 57.7 1608478_at CB969550 hypothetical protein LOC100246825 - 2e-17 At5g09810 ACT7 (ACTIN 7) S.X. H.G.
0.33 45.7 1608421_at CB911283 - - 3e-1 At5g47090 unknown protein S.X. H.G.
0.26 32.0 1607154_at CA812228 hypothetical protein LOC100266477 - 6e-5 At5g18420 unknown protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.5 95.7 GSM287879 Green hard berry C19 from plant 2 cluster distal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
3.1 94.6 GSM287886 Green soft berry C22 from plant 2 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
3.1 94.6 GSM287903 Red soft berry A7 from plant 2 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.8 93.4 GSM287866 Green hard berry B21 from plant 1 cluster proximal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.6 92.5 GSM287883 Green soft berry A23 from plant 1 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.6 92.5 GSM287885 Green soft berry A22 from plant 2 cluster proximal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.6 92.5 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
2.5 91.9 GSM287888 Green soft berry C24 from plant 2 cluster distal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
2.5 91.9 GSM287902 Red soft berry C30 from plant 2 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
2.4 91.3 GSM287887 Green soft berry C23 from plant 2 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 3e-1 36 1618013_at CF519167 oligosaccharyl transferase STT3 protein-like - 7e-77 At5g19690 STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A) C.G. S.X.
0.01 1e+0 34 1621032_at CD797702 hypothetical protein LOC100266707 - 2e-6 At4g24110 unknown protein C.G. S.X.
0.01 1e+0 34 1619925_at CA813994 hypothetical protein LOC100263360 - 4e-1 At1g72360 ethylene-responsive element-binding protein, putative C.G. S.X.
0.01 1e+0 34 1617224_at CB915321 - - 4e+0 At4g30380 EXLB2 (EXPANSIN-LIKE B2 PRECURSOR) C.G. S.X.
0.01 1e+0 34 1614767_at CF213285 hypothetical protein LOC100255092 - 1e+0 At3g45443 unknown protein C.G. S.X.
0.01 1e+0 34 1614084_at CD718792 - - 3e-1 At2g18810 DNA binding C.G. S.X.
0.01 1e+0 34 1613401_at CB915321 hypothetical protein LOC100251358 - 4e+0 At4g30380 EXLB2 (EXPANSIN-LIKE B2 PRECURSOR) C.G. S.X.
0.01 1e+0 34 1610291_at CD718792 - - 3e-1 At2g18810 DNA binding C.G. S.X.
0.02 4e+0 32 1620141_at CF207513 - - 5e+0 At4g15110 CYP97B3 C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 4e-89 329 Arabidopsis thaliana At3g03380 821268 DegP7 (DegP protease 7) Encodes a putative DegP protease. - - - C.G. S.X.
0.41 5e-105 383 Glycine max Gma.8288.1.S1_at BU550070 - - 6e-29 At3g03380 DegP7 (DegP protease 7) C.G. S.X.
0.27 1e-50 200 Hordeum vulgare Contig7623_at Contig7623 - - 3e-14 At3g03380 DegP7 (DegP protease 7) C.G. S.X.
0.24 3e-36 155 Oryza sativa Os02g0712000 AK065045.1 - PDZ/DHR/GLGF domain containing protein 1e-10 At3g03380 DegP7 (DegP protease 7) C.G. S.X.
0.49 2e-178 626 Populus trichocarpa PtpAffx.34591.1.S1_s_at CV283632 hypothetical protein - 4e-39 At3g03380 DegP7 (DegP protease 7) C.G. S.X.
0.26 1e-21 105 Triticum aestivum Ta.24767.1.S1_at CD894586 - - 5e-5 At3g03380 DegP7 (DegP protease 7) C.G. S.X.
0.13 2e-18 93 Zea mays ZmAffx.452.1.A1_at AI677152 - - 3e-6 At3g03380 DegP7 (DegP protease 7) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage