Gene omics information

Query gene ID 1610821_at
Gene name hypothetical protein LOC100253493
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5779.81610821_atCB971061hypothetical protein LOC100253493-6e-48At2g30490C4H (CINNAMATE-4-HYDROXYLASE)S.X.H.G.
0.6384.31616191_s_atCB971061hypothetical protein LOC100253493-6e-48At2g30490C4H (CINNAMATE-4-HYDROXYLASE)S.X.H.G.
0.6384.31614440_atBQ7969223-deoxy-D-arabino-heptulosonate 7-phosphate synthase-2e-53At4g39980DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1)S.X.H.G.
0.6183.21616944_atCF211395hypothetical protein LOC100261951-1e-1At5g65400unknown proteinS.X.H.G.
0.5779.81619357_atCB9723163-deoxy-D-arabino-heptulosonate-7-phosphate synthase-3e-71At1g224102-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putativeS.X.H.G.
0.4260.11618362_s_atCF200684.1hypothetical protein LOC100255189-2e-74At1g10670ACLA-1S.X.H.G.
0.4057.71620412_atCF511306hypothetical protein LOC100247288-6e-10At1g36160ACC1 (ACETYL-COENZYME A CARBOXYLASE 1)S.X.H.G.
0.3650.71615742_atCB9706705-enolpyruvylshikimate-3-phosphate synthase-8e-121At2g453003-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthaseS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.699.9GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
15.899.9GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
9.999.6GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
8.699.5GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.098.0GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.597.5GSM299460D_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.196.9GSM147718Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation47
3.194.6GSM436353Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.793.0GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436385Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.96031461616191_s_atCB971061hypothetical protein LOC100253493-6e-48At2g30490C4H (CINNAMATE-4-HYDROXYLASE)C.G.S.X.
0.027e-5481621363_atCA809467hypothetical protein LOC100250687-5e-4At1g13080CYP71B2 (CYTOCHROME P450 71B2)C.G.S.X.
0.027e-5481613920_atCB979957hypothetical protein LOC100260935-2e+0At1g07830ribosomal protein L29 family proteinC.G.S.X.
0.011e-3441622195_atCB969266hypothetical protein LOC100248937-3e-15At4g07990DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.021e-3441621663_atCF211908--5e-1At4g04650-C.G.S.X.
0.021e-3441621610_atCF372731--8e-6At4g28240wound-responsive protein-relatedC.G.S.X.
0.011e-3441620195_atCB347615hypothetical protein LOC100254082-4e-33At1g76010nucleic acid bindingC.G.S.X.
0.021e-3441618494_atCF405291hypothetical protein LOC100264126-7e-5At1g18010-C.G.S.X.
0.011e-3441614437_atCF406008--5e-1At3g25882NIMIN-2 (NIM1-INTERACTING 2)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.196e-48192Arabidopsis thalianaAt2g30490817599C4H (CINNAMATE-4-HYDROXYLASE)Encodes a cinnamate-4-hydroxylase.---C.G.S.X.
0.397e-98359Glycine maxGma.3881.1.S1_atX92437.1--8e-23At2g30490C4H (CINNAMATE-4-HYDROXYLASE)C.G.S.X.
0.132e-21103Hordeum vulgareContig3442_atContig3442--2e-28At2g30490C4H (CINNAMATE-4-HYDROXYLASE)C.G.S.X.
0.132e-40169Oryza sativaOs01g08200009629.m05941-Trans-cinnamate 4-monooxygenase (EC 1.14.13.11)(Cinnamic acid 4- hydroxylase) (CA4H) (C4H) (P450C4H)(Cytochrome P450 73)1e-17At2g30490C4H (CINNAMATE-4-HYDROXYLASE)C.G.S.X.
0.411e-130468Populus trichocarpaPtp.336.1.S1_atCK088430cytochrome P450-5e-35At2g30490C4H (CINNAMATE-4-HYDROXYLASE)C.G.S.X.
0.101e-1275Triticum aestivumTaAffx.58737.1.S1_atCA616756--4e+0At5g07500PEI1C.G.S.X.
0.145e-53208Zea maysZm.7134.1.S1_atCF634276hypothetical protein LOC100272801 /// trans-cinnamate 4-monooxygenase-1e-18At2g30490C4H (CINNAMATE-4-HYDROXYLASE)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage