Gene omics information

Query gene ID 1610744_at
Gene name hypothetical protein LOC100258016
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9599.61610744_atCF415597hypothetical protein LOC100258016-1e+0At2g47170ARF1A1CS.X.H.G.
0.3548.51613588_atCA818655--6e-175Atcg00730-S.X.H.G.
0.3243.11622423_atCB342360similar to Bifunctional nitrilase/nitrile hydratase NIT4B-1e-13At5g22300NIT4 (NITRILASE 4)S.X.H.G.
0.3243.11614796_atCF609955hypothetical protein LOC100250729-4e-19At1g42960-S.X.H.G.
0.3141.31613635_atCF515464hypothetical protein LOC100242641-2e-1At1g64970G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE)S.X.H.G.
0.3141.31614624_atCB914237hypothetical protein LOC100253628-1e+0At5g61110protein binding / zinc ion bindingS.X.H.G.
0.3039.41607413_atCF607927hypothetical protein LOC100264560-2e-25At3g52950CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinS.X.H.G.
0.2937.71615857_s_atBQ797394hypothetical protein LOC100267827-2e-53At1g01820PEX11C (PEROXIN 11C)S.X.H.G.
0.2632.01615820_atBQ796436hypothetical protein LOC100263593-1e-6At3g07270GTP cyclohydrolase IS.X.H.G.
0.2530.51610886_atBQ799094hypothetical protein LOC100251804-4e+0At5g11412nucleic acid binding / nucleotide bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.699.9GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
4.997.9GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10
4.897.8GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
4.697.6GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.497.3GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.497.3GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
4.397.2GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
3.996.6GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46
3.796.2GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.696.0GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-1341612743_atCB346946hypothetical protein LOC100257720-7e-43At4g2574040S ribosomal protein S10 (RPS10A)C.G.S.X.
0.033e-1341612047_atCD798841hypothetical protein LOC100251465-6e-4At3g17160unknown proteinC.G.S.X.
0.031e+0321621284_atCD008566--3e-1At5g40600unknown proteinC.G.S.X.
0.011e+0321619522_atAY043231.1beta-galactosidase BG1-like-2e-58At1g45130BGAL5 (beta-galactosidase 5)C.G.S.X.
0.021e+0321618573_atCF216076--3e-2At1g29220transcriptional regulator family proteinC.G.S.X.
0.031e+0321617514_atCD008566--3e-1At5g40600unknown proteinC.G.S.X.
0.031e+0321613526_atCF568881--2e-88At5g56030HSP81-2 (HEAT SHOCK PROTEIN 81-2)C.G.S.X.
0.031e+0321611205_atCF203034.1--1e-65At5g56010HSP81-3C.G.S.X.
0.031e+0321608343_atCF201782.1hypothetical protein LOC100258381-1e-4At1g12830unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Arabidopsis thalianaAt2g47170819330ARF1A1CGene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. Members of this family are known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.---C.G.S.X.
0.046e-342Glycine maxPsAffx.psZS006xK11f_s_atPsAffx.psZS006xK11f--3e-1At1g10200WLIM1C.G.S.X.
0.075e-1063Hordeum vulgareContig20708_atContig20708--1e-4At4g13510AMT1C.G.S.X.
0.089e-961Oryza sativaOs04g0509500AK107601.1-Conserved hypothetical protein3e-19At1g64780ATAMT1C.G.S.X.
0.134e-446Populus trichocarpaPtpAffx.215156.1.S1_atpmrna29194ammonium transporter-6e-2At1g64780ATAMT1C.G.S.X.
0.052e-240Triticum aestivumTaAffx.38003.1.S1_atBJ255496--1e+0At1g26220GCN5-related N-acetyltransferase (GNAT) family proteinC.G.S.X.
0.093e-548Zea maysZm.11141.1.A1_atBM338572--1e-7At1g64780ATAMT1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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