Gene omics information

Query gene ID	1610742_at
Gene name	similar to acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1610742_at	CB008464	similar to acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative	-	1e-20	At5g48230	ACAT2 (ACETOACETYL-COA THIOLASE 2)	S.X.	H.G.	Please select
0.80	93.6	1610617_at	CB916396	hypothetical protein LOC100258419	-	6e-3	At2g41475	-	S.X.	H.G.	Please select
0.80	93.6	1612181_at	CF518786	hypothetical protein LOC100241990	-	7e-6	At4g14100	transferase, transferring glycosyl groups	S.X.	H.G.	Please select
0.80	93.6	1621508_at	CB005665	hypothetical protein LOC100260203	-	3e-20	At5g35180	phosphoinositide binding	S.X.	H.G.	Please select
0.57	79.8	1608878_s_at	CB923323	hypothetical protein LOC100244761	-	2e-3	At2g14560	LURP1 (LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA)	S.X.	H.G.	Please select
0.50	72.7	1609101_at	CB921620	hypothetical protein LOC100252214	-	9e-31	At5g34850	PAP26 (PURPLE ACID PHOSPHATASE 26)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.1	99.4	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
7.6	99.3	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
7.3	99.2	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.9	99.1	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.5	98.9	GSM287887	Green soft berry C23 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.5	98.9	GSM287884	Green soft berry C7 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.2	98.8	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.0	98.7	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.0	98.7	GSM287892	Pink soft berry C11 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.6	98.4	GSM287890	Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.64	2e-155	547	1619079_s_at	CB008174	hypothetical protein LOC100240809	-	1e-79	At5g48230	ACAT2 (ACETOACETYL-COA THIOLASE 2)	C.G.	S.X.	Please select
0.42	6e-85	313	1620943_at	CF202855.1	-	-	2e-36	At5g48230	ACAT2 (ACETOACETYL-COA THIOLASE 2)	C.G.	S.X.	Please select
0.03	8e-4	44	1610692_at	CF204851.1	-	-	3e-17	At5g48880	PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2)	C.G.	S.X.	Please select
0.04	8e-4	44	1610465_s_at	CB982876	hypothetical LOC100245940	-	2e-13	At5g48880	PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2)	C.G.	S.X.	Please select
0.02	8e-1	34	1621991_at	CB978460	hypothetical protein LOC100243393	-	1e-1	At2g41060	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.01	8e-1	34	1612281_at	CF208454	hypothetical protein LOC100260786	-	8e-13	At5g54160	ATOMT1 (O-METHYLTRANSFERASE 1)	C.G.	S.X.	Please select
0.01	3e+0	32	1618632_at	AF178990.1	-	-	1e-1	At2g47780	rubber elongation factor (REF) protein-related	C.G.	S.X.	Please select
0.02	3e+0	32	1617842_at	CA817262	hypothetical protein LOC100244069	-	8e-3	At3g25800	PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)	C.G.	S.X.	Please select
0.02	3e+0	32	1615419_s_at	CB975116	hypothetical protein LOC100244646	-	1e-10	At2g33220	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.36	1e-20	101	Arabidopsis thaliana	At5g48230	834876	ACAT2 (ACETOACETYL-COA THIOLASE 2)	F:acetyl-CoA C-acetyltransferase activity, catalytic activity;P:embryonic development ending in seed dormancy;C:peroxisome, plasma membrane;BOMFAP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.42	6e-39	163	Glycine max	GmaAffx.90393.1.S1_s_at	CF806118	-	-	6e-46	At5g48230	ACAT2 (ACETOACETYL-COA THIOLASE 2)	C.G.	S.X.	Please select
0.23	5e-25	115	Hordeum vulgare	Contig3472_at	Contig3472	-	-	1e-24	At5g48230	ACAT2 (ACETOACETYL-COA THIOLASE 2)	C.G.	S.X.	Please select
0.35	3e-32	141	Oryza sativa	Os09g0252100	AK059654.1	-	Acetyl-CoA C-acetyltransferase	2e-35	At5g48230	ACAT2 (ACETOACETYL-COA THIOLASE 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.68	0	732	Populus trichocarpa	Ptp.2967.1.S1_s_at	DN489007	hypothetical protein	-	5e-42	At5g48230	ACAT2 (ACETOACETYL-COA THIOLASE 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.25	4e-21	103	Triticum aestivum	Ta.27589.1.S1_at	BE442527	-	-	2e-17	At5g48230	ACAT2 (ACETOACETYL-COA THIOLASE 2)	C.G.	S.X.	Please select
0.18	9e-20	97	Zea mays	Zm.16489.1.S1_at	CF637893	thiolase1	-	1e-12	At5g48230	ACAT2 (ACETOACETYL-COA THIOLASE 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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