Gene omics information

Query gene ID 1610666_at
Gene name hypothetical protein LOC100259734
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7792.31610666_atCF518956hypothetical protein LOC100259734-2e-8At5g49890CLC-C (CHLORIDE CHANNEL C)S.X.H.G.
0.5072.71619103_s_atCF206471.1hypothetical protein LOC100256831-7e-1At2g33330PDLP3 (PLASMODESMATA-LOCATED PROTEIN 3)S.X.H.G.
0.3853.61607086_atCD006146hypothetical protein LOC100268041-1e+0At3g54560HTA11S.X.H.G.
0.3650.71608615_atBQ799732hypothetical protein LOC100255091-2e-33At3g61440CYSC1 (CYSTEINE SYNTHASE C1)S.X.H.G.
0.2937.71607176_atCA816314hypothetical protein LOC100260562-8e-8At4g38220aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putativeS.X.H.G.
0.2734.01612862_atCD800183hypothetical protein LOC100251298-1e-3At2g45010unknown proteinS.X.H.G.
0.2124.01616400_s_atCF206159.1hypothetical protein LOC100266723-4e-12At4g23100GSH1 (GLUTAMATE-CYSTEINE LIGASE)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.799.7GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
5.398.2GSM287881Green soft berry B10 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
5.298.2GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
4.897.8GSM287887Green soft berry C23 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
4.897.8GSM299458D_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.797.7GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
4.797.7GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.697.6GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
4.597.5GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
4.497.3GSM287898Red soft berry B14 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-1341618964_atCB339459hypothetical protein LOC100266690-1e-12At3g03100NADH:ubiquinone oxidoreductase family proteinC.G.S.X.
0.031e+0321617797_s_atCF210697hypothetical protein LOC100263260-6e-46At3g46010ADF1 (ACTIN DEPOLYMERIZING FACTOR 1)C.G.S.X.
0.021e+0321613562_atCF210939hypothetical protein LOC100247400-3e-2At1g73010phosphataseC.G.S.X.
0.031e+0321613283_atCB346926--2e-1At3g46230ATHSP17.4C.G.S.X.
0.021e+0321606839_atCF403271hypothetical protein LOC100246502-1e-4At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.025e+0301621071_atCA811292hypothetical LOC100245839-4e-48At2g32260cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putativeC.G.S.X.
0.025e+0301613951_atCF404624hypothetical protein LOC100242676-1e-13At3g06350MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)C.G.S.X.
0.035e+0301613496_atCB914898hypothetical protein LOC100250070-2e-2At1g74510kelch repeat-containing F-box family proteinC.G.S.X.
0.035e+0301612356_atCF606524hypothetical protein LOC100247067-7e-1At1g35820unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-859Arabidopsis thalianaAt5g49890835052CLC-C (CHLORIDE CHANNEL C)member of Anion channel protein family---C.G.S.X.
0.044e-446Glycine maxGmaAffx.27550.1.S1_atBE821149--1e-25At3g27170CLC-B (CHLORIDE CHANNEL B)C.G.S.X.
0.032e+032Hordeum vulgareContig11782_s_atContig11782--1e-2At5g03460unknown proteinC.G.S.X.
0.114e-2099Oryza sativaOs02g0558100AK066353.1-Chloride channel (Fragment)8e-18At5g49890CLC-C (CHLORIDE CHANNEL C)C.G.S.X.
0.158e-33141Populus trichocarpaPtpAffx.223273.1.S1_atpmrna41187Cl-channel clc-7-3e-78At5g49890CLC-C (CHLORIDE CHANNEL C)C.G.S.X.
0.043e-136Triticum aestivumTaAffx.54126.1.S1_atCA685424--1e+0At4g32900aminoacyl-tRNA hydrolaseC.G.S.X.
0.022e+032Zea maysZm.17702.1.A1_atCK369720--2e+0At3g10790F-box family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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