CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1610570_at

Gene name hypothetical protein LOC100246879

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.46 66.5 1610570_at CA807939 hypothetical protein LOC100246879 - 2e-24 At5g24430 calcium-dependent protein kinase, putative / CDPK, putative S.X. H.G.
0.67 87.9 1610597_at BQ800069 hypothetical protein LOC100251901 - 2e-9 At2g24100 unknown protein S.X. H.G.
0.60 81.9 1606642_at CB920109 hypothetical protein LOC100257219 - 1e-3 At2g21620 RD2 S.X. H.G.
0.50 72.7 1612510_at CB919682 hypothetical protein LOC100250654 - 1e-10 At2g11520 CRCK3 S.X. H.G.
0.44 64.1 1613560_at CB976184 hypothetical protein LOC100241749 - 4e-3 At5g24260 prolyl oligopeptidase family protein S.X. H.G.
0.40 57.7 1617932_at CF511103 hypothetical protein LOC100260043 - 2e-43 At5g51570 band 7 family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.6 99.3 GSM299462 D_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
7.2 99.1 GSM299453 B_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.5 98.9 GSM299461 C_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.2 97.1 GSM299459 D_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.2 97.1 GSM299455 C_ni_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.7 96.2 GSM299454 B_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.5 95.7 GSM299452 B_ni_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.2 94.9 GSM299451 B_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.9 93.8 GSM299458 D_ni_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.6 92.5 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-1 34 1622607_at AF271662.1 hypothetical protein LOC100250080 - 1e-8 At2g36830 GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN) C.G. S.X.
0.03 5e-1 34 1622188_at CF373833 - - 4e+0 At5g66800 unknown protein C.G. S.X.
0.02 5e-1 34 1621952_at BQ797666 hypothetical protein LOC100259489 - 3e-54 At5g20570 RBX1 (RING-BOX 1) C.G. S.X.
0.02 5e-1 34 1620033_at CB003265 - - 2e-87 At5g03730 CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1) C.G. S.X.
0.02 5e-1 34 1616234_at CB003265 - - 2e-87 At5g03730 CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1) C.G. S.X.
0.03 5e-1 34 1614419_at CD719790 - - 1e+0 At5g14200 3-isopropylmalate dehydrogenase, chloroplast, putative C.G. S.X.
0.03 5e-1 34 1614387_s_at AF271662.1 hypothetical protein LOC100250080 - 1e-8 At2g36830 GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN) C.G. S.X.
0.03 5e-1 34 1614275_at CF204956.1 - - 4e+0 At2g36916 unknown protein C.G. S.X.
0.03 5e-1 34 1610638_at CD719790 - - 1e+0 At5g14200 3-isopropylmalate dehydrogenase, chloroplast, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 2e-24 113 Arabidopsis thaliana At5g24430 832514 calcium-dependent protein kinase, putative / CDPK, putative F:in 6 functions;P:N-terminal protein myristoylation;C:plasma membrane;MOPFBVA - - - C.G. S.X.
0.09 6e-7 56 Glycine max Gma.17975.2.S1_at BQ628976 - - 2e-29 At3g50530 CRK (CDPK-related kinase) C.G. S.X.
0.35 2e-29 129 Hordeum vulgare Contig16466_at Contig16466 - - 4e-15 At2g46700 calcium-dependent protein kinase, putative / CDPK, putative C.G. S.X.
0.29 1e-36 155 Oryza sativa Os.20211.1.S1_at - - - 0 C.G. S.X.
0.47 6e-155 547 Populus trichocarpa PtpAffx.210312.1.S1_at pmrna20295 CPK related kinase 4 - 1e-18 At5g24430 calcium-dependent protein kinase, putative / CDPK, putative C.G. S.X.
0.29 7e-31 135 Triticum aestivum Ta.17648.1.S1_at CA623067 - - 4e-20 At2g46700 calcium-dependent protein kinase, putative / CDPK, putative C.G. S.X.
0.30 1e-45 182 Zea mays Zm.42.1.S1_at D84508.1 CDPK-related protein kinase - 9e-17 At2g46700 calcium-dependent protein kinase, putative / CDPK, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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