CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1610527_at

Gene name hypothetical protein LOC100260552

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 79.4 1610527_at CA815926 hypothetical protein LOC100260552 - 4e-3 At3g18830 ATPLT5 (POLYOL TRANSPORTER 5) S.X. H.G.
0.73 90.8 1621308_at CA809074 hypothetical protein LOC100256114 - 4e+0 At5g24040 F-box family protein S.X. H.G.
0.60 81.9 1610959_at CD720524 hypothetical protein LOC100263719 - 4e-7 At2g45830 DTA2 (DOWNSTREAM TARGET OF AGL15 2) S.X. H.G.
0.43 61.5 1619514_at CF515665 hypothetical protein LOC100267059 - 7e-2 At4g24660 ATHB22 (HOMEOBOX PROTEIN 22) S.X. H.G.
0.43 61.5 1618484_at CD719900 - - 6e+0 At5g63870 PP7 (SERINE/THREONINE PHOSPHATASE 7) S.X. H.G.
0.35 48.5 1618357_at BM436791 hypothetical protein LOC100248984 - 2e+0 At3g55820 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.3 99.7 GSM322368 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
11.0 99.7 GSM322366 genotype: Chardonnay - disease type: Healthy - rep3 GSE12842 Gene expression in grapevine in response to Bois noir infection
10.5 99.7 GSM322367 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
10.2 99.6 GSM322370 genotype: Incrocio Manzoni - disease type: Healthy - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
10.0 99.6 GSM322365 genotype: Chardonnay - disease type: Healthy - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
9.9 99.6 GSM322369 genotype: Incrocio Manzoni - disease type: Healthy - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
9.7 99.6 GSM322363 genotype: Chardonnay - disease type: Bois Noir infected - rep3 GSE12842 Gene expression in grapevine in response to Bois noir infection
7.9 99.3 GSM322361 genotype: Chardonnay - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
6.6 98.9 GSM322362 genotype: Chardonnay - disease type: Bois Noir infected - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
6.3 98.8 GSM322364 genotype: Chardonnay - disease type: Healthy - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 3e-1 36 1613916_at CF404702 hypothetical protein LOC100250922 - 1e-24 At5g64410 OPT4 (OLIGOPEPTIDE TRANSPORTER 4) C.G. S.X.
0.01 3e-1 36 1609684_at CB009168 similar to pyruvate decarboxylase - 3e-41 At5g54960 PDC2 (pyruvate decarboxylase-2) C.G. S.X.
0.01 1e+0 34 1620887_at CA810914 - - 3e+0 At1g50440 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 1e+0 34 1613737_at CB977812 hypothetical protein LOC100260975 - 1e+0 At2g22122 unknown protein C.G. S.X.
0.01 1e+0 34 1609620_at CB979452 - - 7e+0 At5g51845 - C.G. S.X.
0.01 1e+0 34 1607752_at CF513611 hypothetical protein LOC100259452 - 7e-12 At3g18490 aspartyl protease family protein C.G. S.X.
0.01 4e+0 32 1621072_at BQ798954 hypothetical protein LOC100245407 /// hypothetical protein LOC100262565 - 7e-7 At1g28220 ATPUP3 C.G. S.X.
0.01 4e+0 32 1620621_at CF519062 similar to nam-like protein - 4e-33 At1g01720 ATAF1 C.G. S.X.
0.01 4e+0 32 1617150_at BQ792231 - - 4e+0 At3g61898 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 4e-3 44 Arabidopsis thaliana At3g18830 821416 ATPLT5 (POLYOL TRANSPORTER 5) This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The AtPLT5 symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (myo-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily. - - - C.G. S.X.
0.15 3e-17 91 Glycine max Gma.3580.1.S1_at BQ742749 sorbitol-like transporter - 2e-11 At3g18830 ATPLT5 (POLYOL TRANSPORTER 5) C.G. S.X.
0.14 4e-17 89 Hordeum vulgare Contig6707_at Contig6707 - - 2e-11 At3g18830 ATPLT5 (POLYOL TRANSPORTER 5) C.G. S.X.
0.17 2e-9 65 Oryza sativa Os03g0197200 AK073216.1 - Sorbitol transporter 1e-5 At3g18830 ATPLT5 (POLYOL TRANSPORTER 5) C.G. S.X.
0.24 7e-27 123 Populus trichocarpa PtpAffx.204624.1.S1_at pmrna9091 polyol transporter - 6e-20 At2g16130 mannitol transporter, putative C.G. S.X.
0.07 3e-10 67 Triticum aestivum TaAffx.105480.1.S1_at CA733618 - - 2e-5 At3g18830 ATPLT5 (POLYOL TRANSPORTER 5) C.G. S.X.
0.03 2e-6 54 Zea mays Zm.19153.1.A1_at CF637913 hypothetical protein LOC100193474 - 1e-3 At2g16120 mannitol transporter, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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