CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1610423_s_at

Gene name hypothetical protein LOC100250124

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1610423_s_at CB977222 hypothetical protein LOC100250124 - 5e-6 At2g02960 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.71 89.5 1619134_at CB971759 - - 2e+0 At5g53720 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.42 60.1 1615091_at CD801426 hypothetical protein LOC100242289 - 2e-2 At1g13770 - S.X. H.G.
0.42 60.1 1611084_at CA816784 - - 6e+0 At3g26690 ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13) S.X. H.G.
0.35 48.5 1614412_s_at CB971898 hypothetical protein LOC100243985 - 5e-1 At3g17160 unknown protein S.X. H.G.
0.09 9.4 1609620_at CB979452 - - 7e+0 At5g51845 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.4 98.3 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
4.6 97.6 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
3.7 96.2 GSM147741 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 70
3.6 96.0 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
3.5 95.7 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
3.2 94.9 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.7 93.0 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
2.4 91.3 GSM147715 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 44
2.3 90.7 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
2.3 90.7 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.60 1e-164 577 1618527_at CF204019.1 hypothetical protein LOC100250124 - 1e-13 At2g02960 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.11 6e-9 59 1614205_at CF404132 hypothetical protein LOC100256824 - 7e-9 At2g02960 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 9e-2 36 1607552_at CB981895 hypothetical protein LOC100254827 - 2e-1 At2g31690 lipase class 3 family protein C.G. S.X.
0.03 1e+0 32 1615131_at BQ800476 hypothetical protein LOC100253947 - 9e-24 At5g64400 - C.G. S.X.
0.03 1e+0 32 1606590_at CF607832 hypothetical protein LOC100261815 - 8e-26 At3g13470 chaperonin, putative C.G. S.X.
0.03 6e+0 30 1621959_at CF203829.1 - - 1e+1 At5g25020 unknown protein C.G. S.X.
0.02 6e+0 30 1620241_at CB002686 - - 1e+0 At2g28950 ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6) C.G. S.X.
0.02 6e+0 30 1620046_at BQ793423 hypothetical protein LOC100245892 - 4e-14 At5g17520 RCP1 (ROOT CAP 1) C.G. S.X.
0.03 6e+0 30 1619617_at CF202047.1 - - 8e-1 At3g48940 remorin family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 5e-6 52 Arabidopsis thaliana At2g02960 814825 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFV - - - C.G. S.X.
0.04 7e+0 32 Glycine max PsAffx.psML004xF09f_at PsAffx.psML004xF09f - - 8e-1 At2g37430 zinc finger (C2H2 type) family protein (ZAT11) C.G. S.X.
0.02 1e-2 40 Hordeum vulgare Contig4595_s_at Contig4595 - - 6e-8 At1g14260 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.04 6e-4 46 Oryza sativa Os02g0577100 CB673400 - Zn-finger, RING domain containing protein 1e-8 At2g02960 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.09 7e-3 42 Populus trichocarpa PtpAffx.1002.2.A1_a_at CN550112 hypothetical protein - 5e-6 At1g14260 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.04 5e+0 32 Triticum aestivum TaAffx.59336.1.S1_at CA603067 - - 4e+0 At4g11760 LCR17 (Low-molecular-weight cysteine-rich 17) C.G. S.X.
0.03 2e+0 32 Zea mays Zm.1296.1.S1_at CF623659 hypothetical protein LOC100193371 - 7e-4 At5g62460 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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