Gene omics information

Query gene ID	1610292_at
Gene name	hypothetical protein LOC100255417
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.69	88.3	1610292_at	CB345949	hypothetical protein LOC100255417	-	3e-50	At5g26360	chaperonin, putative	S.X.	H.G.	Please select
0.56	79.4	1616242_at	CF213196	hypothetical protein LOC100263350	-	2e-1	At4g18500	unknown protein	S.X.	H.G.	Please select
0.49	69.3	1620772_at	CF607066	hypothetical protein LOC100252015	-	3e-26	At5g53620	unknown protein	S.X.	H.G.	Please select
0.48	68.8	1620897_at	CF603365	similar to F-box-containing protein 2	-	3e-4	At1g06110	SKIP16 (SKP1/ASK-interacting protein 16)	S.X.	H.G.	Please select
0.46	66.5	1612774_at	CF210198	hypothetical protein LOC100261536	-	2e+0	At5g40900	unknown protein	S.X.	H.G.	Please select
0.44	64.1	1609180_at	CD719738	hypothetical protein LOC100252789	-	3e-32	At5g27620	CYCH	S.X.	H.G.	Please select
0.43	61.5	1607886_at	CF604620	hypothetical protein LOC100255368	-	1e-9	At3g19760	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative	S.X.	H.G.	Please select
0.39	54.9	1620627_at	CF214379	hypothetical protein LOC100259195	-	1e-22	At1g20110	zinc finger (FYVE type) family protein	S.X.	H.G.	Please select
0.37	51.7	1619392_at	CF513478	hypothetical protein LOC100259847	-	4e+0	At3g24060	self-incompatibility protein-related	S.X.	H.G.	Please select
0.34	46.8	1609918_at	CF414641	hypothetical protein LOC100259885	-	1e-1	At3g55460	SCL30	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.5	99.8	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
7.1	99.1	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.2	97.1	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.9	96.6	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.5	95.7	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436391	V. riparia (VR, PI588259) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e-2	36	1620404_at	CF203552.1	-	-	2e-36	At3g11830	chaperonin, putative	C.G.	S.X.	Please select
0.03	7e-2	36	1607101_s_at	CF603353	hypothetical protein LOC100245611	-	2e-67	At3g11830	chaperonin, putative	C.G.	S.X.	Please select
0.03	1e+0	32	1617414_at	CF204226.1	-	-	1e-18	At5g25560	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.03	1e+0	32	1613903_at	CB980401	-	-	1e+0	At1g29420	-	C.G.	S.X.	Please select
0.03	1e+0	32	1613562_at	CF210939	hypothetical protein LOC100247400	-	3e-2	At1g73010	phosphatase	C.G.	S.X.	Please select
0.02	1e+0	32	1612834_at	CF215135	hypothetical protein LOC100264546	-	2e-17	At1g13450	DNA binding protein GT-1	C.G.	S.X.	Please select
0.03	1e+0	32	1607178_at	CD801946	hypothetical protein LOC100259500	-	1e-40	At3g50000	CKA2 (CASEIN KINASE II, ALPHA CHAIN 2)	C.G.	S.X.	Please select
0.03	1e+0	32	1606814_at	CF372213	hypothetical protein LOC100246736	-	1e-12	At5g60020	LAC17 (laccase 17)	C.G.	S.X.	Please select
0.03	5e+0	30	1620686_at	CF510724	hypothetical protein LOC100255018	-	1e-6	At1g09610	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.21	3e-50	198	Arabidopsis thaliana	At5g26360	832705	chaperonin, putative	F:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:unknown;BOMFPAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.44	6e-43	174	Glycine max	GmaAffx.68649.1.S1_at	BG238929	-	-	1e-32	At5g26360	chaperonin, putative	C.G.	S.X.	Please select
0.04	5e-1	34	Hordeum vulgare	Contig21455_at	Contig21455	-	-	1e-11	At3g10090	40S ribosomal protein S28 (RPS28A)	C.G.	S.X.	Please select
0.23	5e-44	178	Oryza sativa	Os02g0247200	AK102024.1	-	T-complex protein 1, gamma subunit (TCP-1-gamma)(CCT-gamma) (Matricin)	6e-73	At5g26360	chaperonin, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.36	2e-43	176	Populus trichocarpa	PtpAffx.7885.2.S1_at	BI138978	hypothetical protein	-	1e-103	At5g26360	chaperonin, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.14	2e-35	149	Triticum aestivum	Ta.2554.1.S1_x_at	CK210349	-	-	1e-46	At5g26360	chaperonin, putative	C.G.	S.X.	Please select
0.19	3e-36	151	Zea mays	Zm.16810.1.A1_at	CF053948	T-complex protein 1 subunit gamma	-	3e-32	At5g26360	chaperonin, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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