Gene omics information

Query gene ID	1610276_s_at
Gene name	hypothetical protein LOC100244121
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1610276_s_at	CB346407	hypothetical protein LOC100244121	-	7e-6	At5g40370	glutaredoxin, putative	S.X.	H.G.	Please select
0.55	77.3	1620214_at	CF372945	hypothetical protein LOC100252624	-	1e+0	At5g39950	ATTRX2 (THIOREDOXIN 2)	S.X.	H.G.	Please select
0.44	64.1	1612618_at	BQ792225	-	-	3e-7	At3g48030	hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.33	45.7	1620441_s_at	BQ797264	similar to vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)	-	3e-85	At4g34720	AVA-P1	S.X.	H.G.	Please select
0.32	43.1	1617562_at	CF512363	hypothetical protein LOC100246010	-	5e-60	At4g14710	acireductone dioxygenase [iron(II)-requiring]/ metal ion binding	S.X.	H.G.	Please select
0.29	37.7	1615480_at	BQ799376	hypothetical protein LOC100247007	-	2e-6	At4g26210	mitochondrial ATP synthase g subunit family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.4	95.5	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.4	95.5	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.2	94.9	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.2	94.9	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM287892	Pink soft berry C11 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.17	3e-27	121	1616518_at	CF202624.1	-	-	4e+0	At2g22000	PROPEP6 (Elicitor peptide 6 precursor)	C.G.	S.X.	Please select
0.10	5e-4	44	1622090_at	CD801504	hypothetical protein LOC100260385	-	1e+0	At5g40370	glutaredoxin, putative	C.G.	S.X.	Please select
0.10	5e-4	44	1618295_at	CD710711	-	-	1e+0	At5g40370	glutaredoxin, putative	C.G.	S.X.	Please select
0.02	5e-1	34	1621677_at	CF513160	hypothetical protein LOC100268122	-	1e-1	At5g16980	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.02	5e-1	34	1607756_s_at	CF519234	hypothetical protein LOC100241574	-	3e-40	At3g08510	ATPLC2 (PHOSPHOLIPASE C 2)	C.G.	S.X.	Please select
0.03	5e-1	34	1607000_at	CD799845	-	-	9e-1	At3g48640	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	1622483_at	CD719191	-	-	7e+0	At2g45070	SEC61 BETA	C.G.	S.X.	Please select
0.02	2e+0	32	1622016_at	CF214587	-	-	4e+0	At4g04423	endo-1,3(4)-beta-glucanase	C.G.	S.X.	Please select
0.02	2e+0	32	1620458_at	BQ795444	hypothetical protein LOC100266069	-	4e+0	At3g23650	protein kinase-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.15	7e-6	52	Arabidopsis thaliana	At5g40370	834035	glutaredoxin, putative	F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:plasma membrane, vacuole;BOMPFV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	4e-8	59	Glycine max	Gma.1650.1.S1_at	BM893382	-	-	6e-9	At5g40370	glutaredoxin, putative	C.G.	S.X.	Please select
0.05	2e-1	36	Hordeum vulgare	Contig3461_at	Contig3461	-	-	2e-5	At5g63030	glutaredoxin, putative	C.G.	S.X.	Please select
0.16	1e-3	46	Oryza sativa	OsAffx.26436.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e-1	36	Populus trichocarpa	Ptp.2716.1.S1_at	AY833406.1	glutaredoxin C1	-	5e-7	At5g63030	glutaredoxin, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.12	1e-4	48	Triticum aestivum	Ta.1071.1.S1_at	AF542185.1	glutaredoxin	-	8e-3	At5g63030	glutaredoxin, putative	C.G.	S.X.	Please select
0.05	1e-2	40	Zea mays	Zm.1464.1.S1_at	BM276908	-	-	2e+0	At3g59370	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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