Gene omics information

Query gene ID	1610155_at
Gene name	hypothetical protein LOC100263834
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1610155_at	CF210468	hypothetical protein LOC100263834	-	2e-25	At1g16080	unknown protein	S.X.	H.G.	Please select
0.91	98.8	1614138_at	CA815957	hypothetical protein LOC100254839	-	3e-14	At1g68590	plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative	S.X.	H.G.	Please select
0.80	93.6	1608691_at	CB345817	hypothetical protein LOC100248623	-	6e-27	At1g78630	emb1473 (embryo defective 1473)	S.X.	H.G.	Please select
0.80	93.6	1621569_at	CD801894	hypothetical protein LOC100257626	-	4e-7	At3g27850	RPL12-C (ribosomal protein l12-c)	S.X.	H.G.	Please select
0.80	93.6	1616390_at	CF211469	hypothetical protein LOC100248042	-	1e-41	At3g13120	30S ribosomal protein S10, chloroplast, putative	S.X.	H.G.	Please select
0.71	89.5	1620854_at	CA818411	hypothetical protein LOC100258321	-	7e-12	At1g29070	ribosomal protein L34 family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.6	98.4	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
5.4	98.3	GSM147673	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	2
5.2	98.2	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
5.0	98.0	GSM147695	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	24
4.8	97.8	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
4.8	97.8	GSM147692	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	21
4.5	97.5	GSM147679	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	8
4.5	97.5	GSM147674	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	3
4.5	97.5	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
4.4	97.3	GSM147691	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation	20

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	2e-1	36	1609345_s_at	L34836.1	malate dehydrogenase (NADP+)	-	7e-73	At2g19900	ATNADP-ME1 (NADP-malic enzyme 1)	C.G.	S.X.	Please select
0.03	6e-1	34	1620849_at	CF512962	-	-	7e-8	At3g45630	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.02	6e-1	34	1608595_at	CF413802	-	-	1e+0	At4g04580	myb family transcription factor	C.G.	S.X.	Please select
0.02	2e+0	32	1622237_at	CD006210	-	-	5e+0	At4g16295	SPH1 (S-PROTEIN HOMOLOGUE 1)	C.G.	S.X.	Please select
0.01	2e+0	32	1621103_at	CB003423	-	-	2e-12	At3g04570	DNA-binding protein-related	C.G.	S.X.	Please select
0.02	2e+0	32	1621181_at	CB921745	hypothetical protein LOC100253488	-	7e-24	At5g58490	cinnamoyl-CoA reductase family	C.G.	S.X.	Please select
0.01	2e+0	32	1618262_at	CF207578	hypothetical protein LOC100255430	-	5e-66	At5g65110	ACX2 (ACYL-COA OXIDASE 2)	C.G.	S.X.	Please select
0.02	2e+0	32	1615531_at	CB347122	hypothetical protein LOC100248795	-	8e-20	At1g77260	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.02	2e+0	32	1615063_at	CD712471	-	-	1e+0	At2g36610	ATHB22 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.39	2e-25	117	Arabidopsis thaliana	At1g16080	838178	unknown protein	F:unknown;P:unknown;C:apoplast, chloroplast stroma, chloroplast, chloroplast envelope;POB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.35	3e-34	147	Glycine max	Gma.1398.1.S1_x_at	BE820998	-	-	1e-20	At1g16080	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	Hordeum vulgare	EBro08_SQ009_K19_at	EBro08_SQ009_K19	-	-	1e+1	At5g03345	-	C.G.	S.X.	Please select
0.21	2e-17	91	Oryza sativa	Os.48405.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.44	1e-122	440	Populus trichocarpa	Ptp.3990.1.S1_s_at	CV263217	hypothetical protein	-	2e-59	At1g16080	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	2e-6	54	Triticum aestivum	Ta.22499.1.S1_x_at	CA621281	-	-	6e-4	At1g16080	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	32	Zea mays	ZmAffx.16.1.A1_at	AI491648	-	-	5e+0	At2g02730	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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