CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1610068_at

Gene name hypothetical protein LOC100252154

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1610068_at CD711769 hypothetical protein LOC100252154 - 2e-19 At2g36670 aspartyl protease family protein S.X. H.G.
0.50 72.7 1615815_at CF207323 similar to ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3) - 5e-23 At3g49290 ABIL2 (ABL INTERACTOR-LIKE PROTEIN 2) S.X. H.G.
0.50 72.7 1617328_at CF214435 hypothetical protein LOC100247950 - 8e-43 At4g36750 quinone reductase family protein S.X. H.G.
0.46 66.5 1620542_at CB344230 hypothetical protein LOC100255788 - 9e-31 At2g16800 high-affinity nickel-transport family protein S.X. H.G.
0.33 45.7 1607286_at CF207311 hypothetical protein LOC100267511 - 3e-69 At3g12150 unknown protein S.X. H.G.
0.26 32.0 1620426_at CF515986 similar to DNA-binding protein - 1e-20 At1g13960 WRKY4 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.3 99.6 GSM299453 B_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
9.2 99.5 GSM299462 D_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.4 98.9 GSM299452 B_ni_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.9 98.6 GSM299459 D_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.3 98.2 GSM299458 D_ni_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.1 98.1 GSM299455 C_ni_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.8 97.8 GSM299460 D_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.7 97.7 GSM299454 B_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.2 97.1 GSM299461 C_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.6 96.0 GSM299451 B_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 2169 1622742_at CD711769 - - 2e-19 At2g36670 aspartyl protease family protein C.G. S.X.
0.02 2e-1 36 1620983_at CF207286 hypothetical protein LOC100267272 - 3e-10 At5g01320 pyruvate decarboxylase, putative C.G. S.X.
0.02 7e-1 34 1618557_at CF211433 hypothetical protein LOC100263493 - 1e-7 At3g54450 transporter C.G. S.X.
0.03 7e-1 34 1613827_s_at CF605160 hypothetical protein LOC100242544 - 3e+0 At2g06908 unknown protein C.G. S.X.
0.02 7e-1 34 1613379_at CD720218 - - 5e+0 At3g27680 self-incompatibility protein-related C.G. S.X.
0.02 7e-1 34 1609608_at CD720218 - - 5e+0 At3g27680 self-incompatibility protein-related C.G. S.X.
0.01 7e-1 34 1607806_at BQ794847 - - 3e-2 At3g19460 reticulon family protein (RTNLB11) C.G. S.X.
0.02 3e+0 32 1622863_at BQ799387 hypothetical protein LOC100263074 - 4e+0 At5g56100 glycine-rich protein / oleosin C.G. S.X.
0.02 3e+0 32 1622584_at CF206482.1 hypothetical protein LOC100248604 - 3e-26 At2g16740 UBC29 (ubiquitin-conjugating enzyme 29) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 2e-19 97 Arabidopsis thaliana At2g36670 818239 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;MPFO - - - C.G. S.X.
0.08 5e-8 59 Glycine max Gma.13442.1.A1_at CD398139 - - 5e-3 At2g36670 aspartyl protease family protein C.G. S.X.
0.02 1e+0 34 Hordeum vulgare HY05D01u_at HY05D01u - - 2e+0 At5g25210 unknown protein C.G. S.X.
0.02 7e-2 40 Oryza sativa Os01g0777200 NM_191475.1 - Peptidase A1, pepsin family protein 6e-2 At2g36670 aspartyl protease family protein C.G. S.X.
0.14 2e-35 151 Populus trichocarpa Ptp.742.1.A1_at CV241305 hypothetical protein - 1e-10 At2g36670 aspartyl protease family protein C.G. S.X.
0.03 2e+0 34 Triticum aestivum Ta.1896.1.S1_at BQ161399 - - 1e+0 At5g01980 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 4e+0 32 Zea mays Zm.11815.2.A1_at CF633924 - - 5e-1 At2g07706 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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