CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1610064_at

Gene name similar to DNA-binding protein

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1610064_at CB341653 similar to DNA-binding protein - 3e-19 At2g38470 WRKY33 S.X. H.G.
0.91 98.8 1622399_at CF206628.1 similar to DNA-binding protein - 2e-27 At4g31550 WRKY11 S.X. H.G.
0.83 94.6 1609171_at CA813062 hypothetical protein LOC100251782 - 2e-2 At1g07530 SCL14 (SCARECROW-LIKE 14) S.X. H.G.
0.67 87.9 1609265_at CD800725 hypothetical protein LOC100255460 - 5e-2 At3g60530 zinc finger (GATA type) family protein S.X. H.G.
0.67 87.9 1611285_s_at CA809190 similar to DNA-binding protein - 3e-22 At4g31550 WRKY11 S.X. H.G.
0.55 77.3 1619985_at CD004602 hypothetical protein LOC100262198 - 3e-1 At1g07530 SCL14 (SCARECROW-LIKE 14) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.9 99.5 GSM436413 V. riparia (VR, PI588259) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
8.3 99.4 GSM436414 V. riparia (VR, PI588259) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
7.7 99.3 GSM436351 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
6.2 98.8 GSM436350 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.8 97.8 GSM436367 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.5 97.5 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.4 97.3 GSM436349 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.4 97.3 GSM436372 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.8 96.4 GSM436406 V. riparia (VR, PI588259) LD, 15h 42 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436391 V. riparia (VR, PI588259) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-6 52 1622778_at BQ797582 WRKY-type DNA binding protein 1 - 5e-22 At5g13080 WRKY75 C.G. S.X.
0.03 3e-4 46 1620426_at CF515986 similar to DNA-binding protein - 1e-20 At1g13960 WRKY4 C.G. S.X.
0.02 5e-3 42 1611550_at CD800189 hypothetical protein LOC100263619 - 2e-9 At4g11070 WRKY41 C.G. S.X.
0.01 3e-1 36 1622643_at CB002676 hypothetical protein LOC100262909 - 3e-1 At5g51795 Kin17 DNA-binding protein-related C.G. S.X.
0.01 3e-1 36 1618821_at CB002676 - - 3e-1 At5g51795 Kin17 DNA-binding protein-related C.G. S.X.
0.01 3e-1 36 1617488_at CF210515 hypothetical protein LOC100256769 - 2e-1 At5g25090 plastocyanin-like domain-containing protein C.G. S.X.
0.01 3e-1 36 1613391_at CB835299 - - 5e+0 At4g19940 F-box family protein C.G. S.X.
0.01 3e-1 36 1609618_at CB835299 - - 5e+0 At4g19940 F-box family protein C.G. S.X.
0.02 1e+0 34 1617959_s_at CA809016 hypothetical protein LOC100243044 - 6e-12 At3g05550 hypoxia-responsive family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 3e-19 97 Arabidopsis thaliana At2g38470 818429 WRKY33 Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress. - - - C.G. S.X.
0.32 3e-100 367 Glycine max Gma.11203.1.S1_a_at BE657634 WRKY39 protein /// WRKY49 protein - 8e-32 At2g38470 WRKY33 C.G. S.X.
0.08 4e-17 89 Hordeum vulgare Contig7243_at Contig7243 - - 2e-14 At5g07100 WRKY26 C.G. S.X.
0.12 4e-8 61 Oryza sativa Os01g0826400 AY341849.1 - WRKY transcription factor 24 3e-7 At5g07100 WRKY26 C.G. S.X.
0.29 3e-63 244 Populus trichocarpa PtpAffx.100749.1.S1_at CV269142 hypothetical protein - 2e-26 At2g38470 WRKY33 C.G. S.X.
0.08 5e-15 83 Triticum aestivum Ta.4725.1.S1_at CK195830 WRKY transcription factor - 3e-7 At5g07100 WRKY26 C.G. S.X.
0.11 3e-5 50 Zea mays ZmAffx.795.1.A1_at AI770340 - - 3e-3 At5g46350 WRKY8 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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