CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1610048_at

Gene name hypothetical protein LOC100258703

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 93.6 1610048_at CF403624 hypothetical protein LOC100258703 - 3e-4 At5g37310 - S.X. H.G.
0.80 93.6 1606978_s_at CF207835 hypothetical protein LOC100242245 - 5e-1 At1g16680 DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative S.X. H.G.
0.73 90.8 1613050_at CB971087 hypothetical protein LOC100248215 - 5e-4 At1g20470 auxin-responsive family protein S.X. H.G.
0.67 87.9 1617357_at CB921493 hypothetical protein LOC100263238 - 3e-25 At5g57410 unknown protein S.X. H.G.
0.61 83.2 1615779_at CF415379 hypothetical protein LOC100263332 - 2e+1 At5g16567 unknown protein S.X. H.G.
0.59 80.6 1607831_at BQ799075 hypothetical protein LOC100249242 - 8e-7 At3g03950 protein binding S.X. H.G.
0.55 77.3 1609772_at CF511919 hypothetical protein LOC100246247 - 3e-1 At3g56880 VQ motif-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.2 97.1 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.0 96.7 GSM436381 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436352 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436362 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436363 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436376 Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436358 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436377 Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436382 Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 5e-34 143 1611862_at CF568968 - - 3e-4 At1g08350 endomembrane protein 70 family protein C.G. S.X.
0.02 3e-1 34 1611217_at BQ797506 hypothetical protein LOC100243643 - 3e-9 At5g13170 SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29) C.G. S.X.
0.02 1e+0 32 1612085_at CF413799 hypothetical protein LOC100265702 - 2e+0 At2g41945 unknown protein C.G. S.X.
0.03 5e+0 30 1621258_at CB971625 hypothetical protein LOC100245237 - 1e-9 At1g15200 protein-protein interaction regulator family protein C.G. S.X.
0.03 5e+0 30 1621192_at CF516648 hypothetical protein LOC100248705 - 4e+0 At2g27920 SCPL51 (SERINE CARBOXYPEPTIDASE-LIKE 51) C.G. S.X.
0.01 5e+0 30 1618243_at CF604301 hypothetical protein LOC100251610 - 4e-102 At5g60790 ATGCN1 C.G. S.X.
0.02 5e+0 30 1615095_at CB347601 hypothetical protein LOC100266582 - 3e-77 At5g61670 - C.G. S.X.
0.05 5e+0 30 1614620_at CF404986 hypothetical protein LOC100249044 - 5e-37 At5g37310 - C.G. S.X.
0.03 5e+0 30 1611984_at CB918447 - - 9e-2 At3g03590 SWIB complex BAF60b domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e-4 46 Arabidopsis thaliana At5g37310 833705 - F:unknown;P:unknown;C:integral to membrane, Golgi apparatus, plant-type cell wall;MPOF - - - C.G. S.X.
0.04 4e-1 36 Glycine max GmaAffx.82355.1.S1_at BI945849 - - 2e-50 At4g01850 SAM-2 (S-ADENOSYLMETHIONINE SYNTHETASE 2) C.G. S.X.
0.04 2e+0 32 Hordeum vulgare rbaal31m19_s_at rbaal31m19 - - 2e+0 At5g21110 unknown protein C.G. S.X.
0.04 8e+0 32 Oryza sativa OsAffx.10685.1.S1_x_at - - - 0 C.G. S.X.
0.17 1e-16 87 Populus trichocarpa PtpAffx.147308.1.A1_at CV242148 - - 2e-3 At5g37310 - C.G. S.X.
0.04 4e+0 32 Triticum aestivum Ta.750.2.A1_a_at CA608885 - - 1e+0 At1g52330 unknown protein C.G. S.X.
0.04 2e+0 32 Zea mays Zm.9643.1.A1_x_at BM347294 - - 3e+0 At2g07721 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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