CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1609963_at

Gene name hypothetical protein LOC100245055

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1609963_at CF514599 hypothetical protein LOC100245055 - 9e-8 At5g59480 haloacid dehalogenase-like hydrolase family protein S.X. H.G.
0.67 87.9 1616752_at CF510564 hypothetical protein LOC100245055 - 4e+0 At5g59490 haloacid dehalogenase-like hydrolase family protein S.X. H.G.
0.60 81.9 1619722_at CF213692 hypothetical protein LOC100246022 - 7e-26 At5g19010 MPK16 S.X. H.G.
0.55 77.3 1610952_at BQ796872 hypothetical protein LOC100256999 - 4e+0 At3g17680 - S.X. H.G.
0.19 20.9 1607144_at CB971726 similar to plasma membrane H+ ATPase - 1e-175 At3g47950 AHA4 S.X. H.G.
0.07 7.8 1619274_at CD718648 similar to BY-2 kinesin-like protein 10 - 3e-1 At3g17152 enzyme inhibitor/ pectinesterase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.0 98.0 GSM147701 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation 30
4.3 97.2 GSM147689 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 18
3.5 95.7 GSM147707 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation 36
3.2 94.9 GSM436378 Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436357 Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM147683 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 12
2.6 92.5 GSM436376 Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436421 V. riparia (VR, PI588259) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436358 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 3e-26 117 1616752_at CF510564 hypothetical protein LOC100245055 - 4e+0 At5g59490 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.26 1e-22 105 1616302_at CB912509 ripening-related protein-like - 4e-11 At5g02230 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.03 2e-2 38 1609851_at CF512845 hypothetical protein LOC100262748 - 9e-54 At5g67270 ATEB1C (microtubule end binding protein 1) C.G. S.X.
0.02 4e-1 34 1619538_at CB344030 hypothetical protein LOC100258627 - 2e-9 At2g27290 unknown protein C.G. S.X.
0.03 4e-1 34 1612426_at BQ798003 hypothetical protein LOC100242609 - 1e-19 At5g47440 phosphoinositide binding C.G. S.X.
0.06 4e-1 34 1610702_at CD714568 - - 3e-1 At5g59490 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.06 4e-1 34 1606863_at CD714568 - - 3e-1 At5g59490 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.02 2e+0 32 1621396_at CF514715 hypothetical protein LOC100243434 - 5e-13 At4g34000 ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3) C.G. S.X.
0.03 2e+0 32 1620785_at CF205969.1 - - 2e+0 At1g77020 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 9e-8 57 Arabidopsis thaliana At5g59480 836067 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFA - - - C.G. S.X.
0.17 5e-13 75 Glycine max Gma.5606.1.S1_at BI971017 - - 2e-10 At5g02230 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.04 3e-3 42 Hordeum vulgare Contig6491_at Contig6491 - - 6e-1 At5g02230 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.04 1e+1 32 Oryza sativa Os10g0355800 AK062299.1 - ATP synthase beta chain (EC 3.6.3.14) 0 Atcg00350 - C.G. S.X.
0.53 8e-46 184 Populus trichocarpa Ptp.2162.2.S1_s_at BU826941 hypothetical protein - 8e-5 At5g59480 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.07 3e-1 36 Triticum aestivum Ta.14491.1.S1_at BJ287158 - - 3e-6 At5g02230 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.03 2e+0 32 Zea mays Zm.8814.1.A1_at BM336882 - - 5e+0 At1g10095 protein prenyltransferase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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