CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1609929_at

Gene name hypothetical protein LOC100259947

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1609929_at CB346194 hypothetical protein LOC100259947 - 3e+0 At5g02440 unknown protein S.X. H.G.
0.55 77.3 1621919_at CF404571 hypothetical protein LOC100247550 - 2e-8 At4g12780 heat shock protein binding S.X. H.G.
0.36 50.7 1617373_s_at CA816697 hypothetical protein LOC100245878 - 5e-6 At5g23570 SGS3 (SUPPRESSOR OF GENE SILENCING 3) S.X. H.G.
0.33 45.7 1616537_at CF212796 hypothetical protein LOC100244754 - 3e-1 At3g45020 50S ribosomal protein-related S.X. H.G.
0.15 15.6 1609037_at CB342383 - - 4e-3 At5g08350 GRAM domain-containing protein / ABA-responsive protein-related S.X. H.G.
0.13 13.3 1617923_at CB977646 - - 4e+0 At5g52570 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2) S.X. H.G.
0.12 12.1 1611443_at CA818502 - - 9e-1 At1g77885 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.4 99.2 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
6.4 98.9 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
5.3 98.2 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
5.2 98.2 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
5.0 98.0 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
4.5 97.5 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
4.4 97.3 GSM147732 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 61
4.1 96.9 GSM147738 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 67
4.1 96.9 GSM147733 Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation 62
4.0 96.7 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-1 34 1612943_at CB346200 hypothetical protein LOC100250133 - 5e-1 At4g30480 tetratricopeptide repeat (TPR)-containing protein C.G. S.X.
0.03 2e-1 34 1608140_at CF211124 hypothetical protein LOC100258759 - 2e-16 At3g48100 ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5) C.G. S.X.
0.03 9e-1 32 1620453_at CF206259.1 hypothetical protein LOC100254596 - 3e-1 At2g36000 mitochondrial transcription termination factor-related / mTERF-related C.G. S.X.
0.02 9e-1 32 1619989_s_at BQ792762 similar to ADP,ATP carrier protein, mitochondrial - 1e-172 At3g08580 AAC1 (ADP/ATP CARRIER 1) C.G. S.X.
0.03 9e-1 32 1616975_at CF205728.1 - - 1e+0 At5g51845 - C.G. S.X.
0.05 9e-1 32 1613311_at CF372170 hypothetical protein LOC100242739 - 1e+0 At5g40150 peroxidase, putative C.G. S.X.
0.03 9e-1 32 1607359_s_at BQ797168 hypothetical protein LOC100247960 /// hypothetical protein LOC100253084 /// hypothetical protein LOC100256782 - 1e+0 At5g51845 - C.G. S.X.
0.03 4e+0 30 1622300_at CB008253 - - 1e-3 At4g32285 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related C.G. S.X.
0.03 4e+0 30 1619517_at CF202125.1 O-methyltransferase - 4e-1 At4g09000 14-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 32 Arabidopsis thaliana At5g02440 831872 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.04 1e+0 34 Glycine max GmaAffx.72117.1.S1_at CA800442 - - 2e-10 At2g38320 unknown protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare EBpi01_SQ004_D13_at EBpi01_SQ004_D13 - - 3e+0 At2g16720 MYB7 (MYB DOMAIN PROTEIN 7) C.G. S.X.
0.03 4e-1 36 Oryza sativa Os09g0351900 9637.m01570 - - 6e-1 At5g62440 - C.G. S.X.
0.03 1e+0 34 Populus trichocarpa PtpAffx.95267.1.A1_at CV254589 histone deacetylase - 8e-5 At5g63110 HDA6 (HISTONE DEACETYLASE 6) C.G. S.X.
0.04 8e-1 34 Triticum aestivum Ta.18265.1.S1_at CA632817 - - 9e-1 At5g02440 unknown protein C.G. S.X.
0.02 3e-1 34 Zea mays Zm.5385.1.A1_at CF035957 hypothetical protein LOC100216766 - 5e-1 At5g14210 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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