Gene omics information

Query gene ID	1609920_at
Gene name	hypothetical protein LOC100264144
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.52	73.9	1609920_at	CD711951	hypothetical protein LOC100264144	-	4e-30	At5g19820	emb2734 (embryo defective 2734)	S.X.	H.G.	Please select
0.46	66.5	1615684_at	CF604666	hypothetical protein LOC100244706	-	1e-38	At1g67170	unknown protein	S.X.	H.G.	Please select
0.43	61.5	1610495_at	CB980163	hypothetical protein LOC100244069	-	8e-20	At3g25800	PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)	S.X.	H.G.	Please select
0.36	50.7	1613249_at	CF210498	hypothetical protein LOC100251410	-	2e-36	At3g14450	CID9 (CTC-Interacting Domain 9)	S.X.	H.G.	Please select
0.33	45.7	1617274_at	CF372628	hypothetical protein LOC100261092	-	3e-11	At5g11580	UVB-resistance protein-related / regulator of chromosome condensation (RCC1) family protein	S.X.	H.G.	Please select
0.32	43.1	1606434_at	CB918530	similar to glucose-6-phosphate isomerase	-	7e-40	At5g42740	glucose-6-phosphate isomerase, cytosolic (PGIC)	S.X.	H.G.	Please select
0.25	30.5	1609441_at	CB971243	hypothetical protein LOC100262569	-	7e-30	At2g44680	CKB4 (CASEIN KINASE II BETA SUBUNIT 4)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.4	99.2	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.4	98.9	GSM287879	Green hard berry C19 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.2	98.8	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.4	98.3	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.3	98.2	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.6	97.6	GSM287871	Green hard berry C4 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.3	97.2	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.1	96.9	GSM287886	Green soft berry C22 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.0	96.7	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.0	96.7	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e-2	38	1609472_at	CB349683	hypothetical protein LOC100261641	-	4e-8	At3g03790	ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein	C.G.	S.X.	Please select
0.02	2e-1	36	1608721_at	CB972398	hypothetical protein LOC100264514	-	1e-13	At4g32420	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	C.G.	S.X.	Please select
0.02	2e-1	36	1606542_at	BQ797856	hypothetical protein LOC100250325	-	1e+0	At2g10450	14-3-3 protein, putative / grf15, putative	C.G.	S.X.	Please select
0.02	8e-1	34	1622886_at	CB348288	hypothetical protein LOC100252460	-	3e-13	At1g52540	protein kinase, putative	C.G.	S.X.	Please select
0.01	8e-1	34	1615028_at	CF512306	hypothetical protein LOC100244467	-	5e-20	At3g60530	zinc finger (GATA type) family protein	C.G.	S.X.	Please select
0.02	8e-1	34	1613438_at	CB835999	-	-	5e-1	At5g55430	unknown protein	C.G.	S.X.	Please select
0.01	8e-1	34	1611412_at	CF517248	hypothetical protein LOC100244694	-	2e+0	At5g37480	unknown protein	C.G.	S.X.	Please select
0.02	8e-1	34	1609657_at	CB835999	-	-	5e-1	At5g55430	unknown protein	C.G.	S.X.	Please select
0.01	8e-1	34	1607887_at	CF215963	hypothetical protein LOC100241008	-	2e+0	At5g50880	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.18	4e-30	133	Arabidopsis thaliana	At5g19820	832102	emb2734 (embryo defective 2734)	F:lyase activity, binding;P:embryonic development ending in seed dormancy;C:cell wall, phycobilisome;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.41	1e-70	268	Glycine max	GmaAffx.86213.2.S1_at	BM094130	-	-	1e-25	At5g19820	emb2734 (embryo defective 2734)	C.G.	S.X.	Please select
0.27	2e-15	83	Hordeum vulgare	Contig6217_at	Contig6217	-	-	5e-86	At5g19820	emb2734 (embryo defective 2734)	C.G.	S.X.	Please select
0.21	6e-15	83	Oryza sativa	Os03g0701000	AK100005.1	-	ARM repeat fold domain containing protein	8e-74	At5g19820	emb2734 (embryo defective 2734)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.31	4e-83	309	Populus trichocarpa	PtpAffx.203626.1.S1_at	pmrna7186	hypothetical protein	-	2e-179	At5g19820	emb2734 (embryo defective 2734)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	3e-3	44	Triticum aestivum	Ta.4732.2.S1_a_at	CA635200	-	-	1e+0	At3g22275	unknown protein	C.G.	S.X.	Please select
0.13	1e-12	73	Zea mays	Zm.7679.1.A1_at	BM079456	hypothetical protein LOC100273504	-	3e-12	At5g19820	emb2734 (embryo defective 2734)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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