Gene omics information

Query gene ID 1609798_at
Gene name hypothetical protein LOC100255432
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9399.21609798_atCB980206hypothetical protein LOC100255432-7e-30At5g28300trihelix DNA-binding protein, putativeS.X.H.G.
0.3650.71616858_atBQ798567hypothetical protein LOC100252226 /// hypothetical protein LOC100254728-4e-3At3g12740ALIS1 (ALA-INTERACTING SUBUNIT 1)S.X.H.G.
0.2937.71614128_atCB916225similar to ubiquitin carrier protein-5e-82At1g14400UBC1 (UBIQUITIN CARRIER PROTEIN 1)S.X.H.G.
0.2530.51622781_a_atCF214778hypothetical protein LOC100252992-1e-46At3g09900ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E)S.X.H.G.
0.2530.51613515_atCA809086hypothetical protein LOC100257134-2e-1At2g24070unknown proteinS.X.H.G.
0.2428.71619979_atCB973261hypothetical protein LOC100243832-3e-1At4g25280adenylate kinase family proteinS.X.H.G.
0.2022.41607666_atBQ792135hypothetical protein LOC100267597-8e-11At4g39150DNAJ heat shock N-terminal domain-containing proteinS.X.H.G.
0.1010.31615335_s_atCF205989.1hypothetical protein LOC100241327-2e+0At4g15760MO1 (MONOOXYGENASE 1)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.898.6GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
5.698.4GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.797.7GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.497.3GSM436370Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.196.9GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.896.4GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
3.595.7GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
3.094.2GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
3.094.2GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.993.8GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-2381621786_atCB914345hypothetical protein LOC100249921-2e-3At5g67490unknown proteinC.G.S.X.
0.022e-2381613177_atCD004414--3e-3At2g37240-C.G.S.X.
0.034e-1341617819_atCD714842--1e+0At3g06770glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinC.G.S.X.
0.024e-1341615182_atCF210219hypothetical protein LOC100264653-7e-71At5g15490UDP-glucose 6-dehydrogenase, putativeC.G.S.X.
0.034e-1341614005_atCD714842--1e+0At3g06770glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinC.G.S.X.
0.022e+0321618830_atCF206629.1--5e-22At1g51650ATP synthase epsilon chain, mitochondrialC.G.S.X.
0.032e+0321617075_atCF513576hypothetical protein LOC100244234-1e+0At5g04740ACT domain-containing proteinC.G.S.X.
0.022e+0321615003_s_atCF209961hypothetical protein LOC100248446-9e-27At1g51650ATP synthase epsilon chain, mitochondrialC.G.S.X.
0.022e+0321612612_atBQ792194hypothetical protein LOC100267829-3e-52At4g0900014-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.097e-30131Arabidopsis thalianaAt5g28300832914trihelix DNA-binding protein, putativeF:transcription factor activity;P:regulation of transcription;C:chloroplast;OMPFBVA---C.G.S.X.
0.203e-39163Glycine maxGmaAffx.49204.1.S1_atBE022511trihelix transcription factor-7e-12At5g28300trihelix DNA-binding protein, putativeC.G.S.X.
0.054e-548Hordeum vulgareContig19599_atContig19599--6e-3At2g39320OTU-like cysteine protease family proteinC.G.S.X.
0.033e+034Oryza sativaOsAffx.30022.1.S1_at---0C.G.S.X.
0.162e-49196Populus trichocarpaPtpAffx.222704.1.S1_atpmrna40287hypothetical protein-1e-14At5g28300trihelix DNA-binding protein, putativeC.G.S.X.
0.041e+034Triticum aestivumTaAffx.83374.1.S1_atCA658276--2e-1At5g35620LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)C.G.S.X.
0.022e+032Zea maysZm.1607.1.A1_atAY111336.1--2e+0At2g47840tic20 protein-relatedC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage