CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1609772_at

Gene name hypothetical protein LOC100246247

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 93.6 1609772_at CF511919 hypothetical protein LOC100246247 - 3e-1 At3g56880 VQ motif-containing protein S.X. H.G.
0.91 98.8 1613050_at CB971087 hypothetical protein LOC100248215 - 5e-4 At1g20470 auxin-responsive family protein S.X. H.G.
0.71 89.5 1606978_s_at CF207835 hypothetical protein LOC100242245 - 5e-1 At1g16680 DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative S.X. H.G.
0.63 84.3 1610048_at CF403624 hypothetical protein LOC100258703 - 3e-4 At5g37310 - S.X. H.G.
0.57 79.8 1607831_at BQ799075 hypothetical protein LOC100249242 - 8e-7 At3g03950 protein binding S.X. H.G.
0.43 61.5 1620268_at CF517017 - - 2e-1 At5g61630 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.4 95.5 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436379 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436355 Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436349 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436372 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436367 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436369 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436380 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.8 93.4 GSM436350 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e+0 32 1621073_at CB914439 GDP-mannose-3',5'-epimerase - 0 At5g28840 GME (GDP-D-MANNOSE 3',5'-EPIMERASE) C.G. S.X.
0.02 2e+0 32 1620715_at CD720282 - - 1e+0 At5g44920 Toll-Interleukin-Resistance (TIR) domain-containing protein C.G. S.X.
0.02 2e+0 32 1619845_at CB918038 hypothetical protein LOC100252548 - 4e-19 At4g33530 KUP5 C.G. S.X.
0.01 2e+0 32 1616349_a_at CB914439 GDP-mannose-3',5'-epimerase - 0 At5g28840 GME (GDP-D-MANNOSE 3',5'-EPIMERASE) C.G. S.X.
0.04 2e+0 32 1615222_at BQ798175 hypothetical protein LOC100246715 - 6e-13 At1g80940 unknown protein C.G. S.X.
0.02 2e+0 32 1608109_at CD720282 - - 1e+0 At5g44920 Toll-Interleukin-Resistance (TIR) domain-containing protein C.G. S.X.
0.03 6e+0 30 1619558_at CB343149 - - 1e+0 At1g76940 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.03 6e+0 30 1619280_at CF211860 hypothetical protein LOC100261696 - 5e-15 At4g18780 IRX1 (IRREGULAR XYLEM 1) C.G. S.X.
0.02 6e+0 30 1619295_at CA809176 hypothetical protein LOC100264617 - 7e-6 At5g14910 heavy-metal-associated domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 36 Arabidopsis thaliana At3g56880 824855 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF - - - C.G. S.X.
0.23 6e-19 95 Glycine max Gma.4782.1.A1_at AW396763 - - 9e-1 At1g17890 GER2 C.G. S.X.
0.04 2e-1 36 Hordeum vulgare HW04K04u_s_at HW04K04u - - 1e-14 At5g37780 CAM1 (CALMODULIN 1) C.G. S.X.
0.02 3e+0 34 Oryza sativa Os01g0233300 9629.m01298 - Cyclin 4e-1 At1g04960 - C.G. S.X.
0.28 3e-27 123 Populus trichocarpa PtpAffx.83523.1.S1_at DN496561 hypothetical protein - 1e-13 At5g05970 NEDD1 (NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1) C.G. S.X.
0.03 5e+0 32 Triticum aestivum TaAffx.96049.2.S1_at CA648908 - - 4e+0 At2g39920 acid phosphatase class B family protein C.G. S.X.
0.03 6e-1 34 Zea mays ZmAffx.838.1.A1_at AI770588 - - 3e+0 At1g61700 DNA-directed RNA polymerase II, putative (RPB10) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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