Gene omics information

Query gene ID 1609526_at
Gene name hypothetical protein LOC100261349
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.91609526_atCF210472hypothetical protein LOC100261349-2e+0At5g47520AtRABA5a (Arabidopsis Rab GTPase homolog A5a)S.X.H.G.
0.5072.71608014_atCF512552hypothetical protein LOC100249623-7e-14At1g78955CAMS1 (Camelliol C synthase 1)S.X.H.G.
0.3548.51612525_atCF516179hypothetical protein LOC100263804-2e+0At1g77910unknown proteinS.X.H.G.
0.3345.71616098_atCF514166hypothetical protein LOC100244716-3e-4At5g54840SGP1S.X.H.G.
0.2327.51619210_atAF056622.1Cu/Zn superoxide dismutase-like-9e-46At2g28190CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)S.X.H.G.
0.2124.01611115_s_atCB344303hypothetical protein LOC100244716-3e-20At3g21700SGP2S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.899.6GSM436410V. riparia (VR, PI588259) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
9.799.6GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
8.499.4GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
8.399.4GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
5.298.2GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
4.997.9GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
4.997.9GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
4.397.2GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
3.896.4GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
3.696.0GSM436352Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-1341622011_atCB973350--7e-6Atcg00670-C.G.S.X.
0.022e+0321621061_atCF204503.1--1e+0At4g39040RNA bindingC.G.S.X.
0.022e+0321620580_atCB343401--4e+0At5g20160ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinC.G.S.X.
0.022e+0321620072_s_atCF605495similar to Os01g0238200-5e+0At5g52870unknown proteinC.G.S.X.
0.022e+0321619687_atCD798741hypothetical protein LOC100242388-2e+0At5g53880unknown proteinC.G.S.X.
0.022e+0321615970_atCF405892drought responsive element binding protein-1e+0At5g17550PEX19-2C.G.S.X.
0.032e+0321614823_s_atCF204834.1hypothetical protein LOC100266945-4e-2At5g55990CBL2 (CALCINEURIN B-LIKE 2)C.G.S.X.
0.022e+0321614744_atCB977458hypothetical protein LOC100259020-3e-13At3g07210unknown proteinC.G.S.X.
0.022e+0321613980_atCB968799hypothetical protein LOC100264662-2e-6At2g05920subtilase family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt5g47520834802AtRABA5a (Arabidopsis Rab GTPase homolog A5a)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVA---C.G.S.X.
0.287e-1065Glycine maxGmaAffx.86212.1.S1_atBG043474--1e+0Atmg00740-C.G.S.X.
0.032e-136Hordeum vulgareContig25893_atContig25893--5e+0At2g03937-C.G.S.X.
0.038e-136Oryza sativaOsAffx.25930.1.A1_at---0C.G.S.X.
0.258e-28125Populus trichocarpaPtpAffx.223323.1.S1_atpmrna41259hypothetical protein-5e-3At4g19380alcohol oxidase-relatedC.G.S.X.
0.042e+034Triticum aestivumTaAffx.24755.1.S1_atCA713040--2e+0At5g06080LBD33 (LOB DOMAIN-CONTAINING PROTEIN 33)C.G.S.X.
0.025e-238Zea maysZm.17572.1.A1_atBM269508--1e-10At5g46020unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage