CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1609526_at

Gene name hypothetical protein LOC100261349

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1609526_at CF210472 hypothetical protein LOC100261349 - 2e+0 At5g47520 AtRABA5a (Arabidopsis Rab GTPase homolog A5a) S.X. H.G.
0.50 72.7 1608014_at CF512552 hypothetical protein LOC100249623 - 7e-14 At1g78955 CAMS1 (Camelliol C synthase 1) S.X. H.G.
0.35 48.5 1612525_at CF516179 hypothetical protein LOC100263804 - 2e+0 At1g77910 unknown protein S.X. H.G.
0.33 45.7 1616098_at CF514166 hypothetical protein LOC100244716 - 3e-4 At5g54840 SGP1 S.X. H.G.
0.23 27.5 1619210_at AF056622.1 Cu/Zn superoxide dismutase-like - 9e-46 At2g28190 CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2) S.X. H.G.
0.21 24.0 1611115_s_at CB344303 hypothetical protein LOC100244716 - 3e-20 At3g21700 SGP2 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.8 99.6 GSM436410 V. riparia (VR, PI588259) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
9.7 99.6 GSM322366 genotype: Chardonnay - disease type: Healthy - rep3 GSE12842 Gene expression in grapevine in response to Bois noir infection
8.4 99.4 GSM322365 genotype: Chardonnay - disease type: Healthy - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
8.3 99.4 GSM322369 genotype: Incrocio Manzoni - disease type: Healthy - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
5.2 98.2 GSM322363 genotype: Chardonnay - disease type: Bois Noir infected - rep3 GSE12842 Gene expression in grapevine in response to Bois noir infection
4.9 97.9 GSM322364 genotype: Chardonnay - disease type: Healthy - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
4.9 97.9 GSM322361 genotype: Chardonnay - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
4.3 97.2 GSM322370 genotype: Incrocio Manzoni - disease type: Healthy - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.8 96.4 GSM322362 genotype: Chardonnay - disease type: Bois Noir infected - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.6 96.0 GSM436352 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 34 1622011_at CB973350 - - 7e-6 Atcg00670 - C.G. S.X.
0.02 2e+0 32 1621061_at CF204503.1 - - 1e+0 At4g39040 RNA binding C.G. S.X.
0.02 2e+0 32 1620580_at CB343401 - - 4e+0 At5g20160 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein C.G. S.X.
0.02 2e+0 32 1620072_s_at CF605495 similar to Os01g0238200 - 5e+0 At5g52870 unknown protein C.G. S.X.
0.02 2e+0 32 1619687_at CD798741 hypothetical protein LOC100242388 - 2e+0 At5g53880 unknown protein C.G. S.X.
0.02 2e+0 32 1615970_at CF405892 drought responsive element binding protein - 1e+0 At5g17550 PEX19-2 C.G. S.X.
0.03 2e+0 32 1614823_s_at CF204834.1 hypothetical protein LOC100266945 - 4e-2 At5g55990 CBL2 (CALCINEURIN B-LIKE 2) C.G. S.X.
0.02 2e+0 32 1614744_at CB977458 hypothetical protein LOC100259020 - 3e-13 At3g07210 unknown protein C.G. S.X.
0.02 2e+0 32 1613980_at CB968799 hypothetical protein LOC100264662 - 2e-6 At2g05920 subtilase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At5g47520 834802 AtRABA5a (Arabidopsis Rab GTPase homolog A5a) F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVA - - - C.G. S.X.
0.28 7e-10 65 Glycine max GmaAffx.86212.1.S1_at BG043474 - - 1e+0 Atmg00740 - C.G. S.X.
0.03 2e-1 36 Hordeum vulgare Contig25893_at Contig25893 - - 5e+0 At2g03937 - C.G. S.X.
0.03 8e-1 36 Oryza sativa OsAffx.25930.1.A1_at - - - 0 C.G. S.X.
0.25 8e-28 125 Populus trichocarpa PtpAffx.223323.1.S1_at pmrna41259 hypothetical protein - 5e-3 At4g19380 alcohol oxidase-related C.G. S.X.
0.04 2e+0 34 Triticum aestivum TaAffx.24755.1.S1_at CA713040 - - 2e+0 At5g06080 LBD33 (LOB DOMAIN-CONTAINING PROTEIN 33) C.G. S.X.
0.02 5e-2 38 Zea mays Zm.17572.1.A1_at BM269508 - - 1e-10 At5g46020 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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