CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1609508_at

Gene name hypothetical protein LOC100242787

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1609508_at CB976923 hypothetical protein LOC100242787 - 4e-3 At5g45960 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.67 87.9 1618432_at CB345244 hypothetical protein LOC100267315 - 6e+0 At5g13825 unknown protein S.X. H.G.
0.60 81.9 1612382_at CB978155 - - 2e-1 At3g57870 SCE1 (SUMO CONJUGATION ENZYME 1) S.X. H.G.
0.53 75.2 1620398_at CA810891 hypothetical LOC100263767 - 1e-3 At3g09690 hydrolase, alpha/beta fold family protein S.X. H.G.
0.50 72.7 1617386_at CF372270 hypothetical protein LOC100265283 - 2e-27 At3g02580 STE1 (STEROL 1) S.X. H.G.
0.22 25.6 1621016_at CA817314 similar to transporter-related - 3e-10 At5g20380 PHT4 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.4 99.2 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
7.2 99.1 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
6.7 99.0 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
6.6 98.9 GSM147731 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 60
5.8 98.6 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
5.5 98.4 GSM147738 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 67
5.2 98.2 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
5.1 98.1 GSM147724 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 53
5.0 98.0 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
4.7 97.7 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 7e-2 36 1616133_at CB340026 hypothetical protein LOC100243907 - 3e+0 At5g10480 PAS2 (PASTICCINO 2) C.G. S.X.
0.02 3e-1 34 1615814_at CB920915 hypothetical protein LOC100264789 - 0 At3g04120 GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1) C.G. S.X.
0.03 1e+0 32 1619832_at CA818684 hypothetical protein LOC100240976 - 1e-24 At3g44660 hda10 (histone deacetylase 10) C.G. S.X.
0.03 1e+0 32 1617223_at CF403517 - - 2e+1 At5g35470 unknown protein C.G. S.X.
0.03 1e+0 32 1616398_at CF972325.1 - - 3e-1 At1g26310 CAL (CAULIFLOWER) C.G. S.X.
0.02 1e+0 32 1613941_at CA818531 hypothetical protein LOC100251097 - 2e+0 At1g65390 ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5) C.G. S.X.
0.01 5e+0 30 1621982_s_at BQ794582 hypothetical protein LOC100265955 - 1e-14 At1g51410 cinnamyl-alcohol dehydrogenase, putative (CAD) C.G. S.X.
0.03 5e+0 30 1620913_at CF373825 - - 3e+0 At5g16486 - C.G. S.X.
0.04 5e+0 30 1620857_at CF207003.1 - - 4e-2 At1g13635 methyladenine glycosylase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-3 42 Arabidopsis thaliana At5g45960 834636 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM - - - C.G. S.X.
0.06 1e-3 44 Glycine max Gma.1378.1.A1_at AI856663 - - 5e-13 At3g24190 ABC1 family protein C.G. S.X.
0.05 8e+0 30 Hordeum vulgare rbaal22l24_at rbaal22l24 - - 3e+0 At2g37200 integral membrane protein, putative C.G. S.X.
0.03 8e+0 32 Oryza sativa OsAffx.14194.1.S1_at - - - 0 C.G. S.X.
0.08 1e-7 57 Populus trichocarpa Ptp.4981.1.S1_at CV234793 hypothetical protein - 8e-34 At3g24190 ABC1 family protein C.G. S.X.
0.03 4e+0 32 Triticum aestivum Ta.22390.1.S1_at CA742055 - - 3e+0 At2g21600 ATRER1B C.G. S.X.
0.04 7e+0 30 Zea mays ZmAffx.1340.1.S1_at 11990232-88 - - 7e-45 Atcg01080 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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