CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1609414_at

Gene name hypothetical protein LOC100245212

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 94.6 1609414_at CB972963 hypothetical protein LOC100245212 - 2e-5 At4g27700 rhodanese-like domain-containing protein S.X. H.G.
0.44 64.1 1607381_at CB973030 hypothetical protein LOC100245212 - 7e-5 At4g27700 rhodanese-like domain-containing protein S.X. H.G.
0.19 20.9 1615322_at CB342395 hypothetical protein LOC100250934 - 3e-5 At5g19940 plastid-lipid associated protein PAP-related / fibrillin-related S.X. H.G.
0.19 20.9 1609639_at CF511590 hypothetical protein LOC100264314 - 6e-21 At1g69740 HEMB1 S.X. H.G.
0.13 13.3 1612085_at CF413799 hypothetical protein LOC100265702 - 2e+0 At2g41945 unknown protein S.X. H.G.
0.09 9.4 1617204_at CF404742 hypothetical protein LOC100264070 - 2e-21 At2g33800 ribosomal protein S5 family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.2 99.1 GSM147691 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation 20
7.1 99.1 GSM147673 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 2
6.5 98.9 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
6.3 98.8 GSM147692 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation 21
5.7 98.5 GSM147686 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 15
5.6 98.4 GSM147697 Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation 26
5.5 98.4 GSM147685 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 14
5.4 98.3 GSM147690 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation 19
5.3 98.2 GSM147698 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation 27
5.1 98.1 GSM147674 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 3
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 2e-33 141 1607381_at CB973030 hypothetical protein LOC100245212 - 7e-5 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
0.04 3e-1 34 1609655_at CB979026 - - 3e+0 At2g37435 cysteine-type endopeptidase inhibitor C.G. S.X.
0.03 1e+0 32 1621837_at CB349507 - - 4e+0 At4g00810 60S acidic ribosomal protein P1 (RPP1B) C.G. S.X.
0.03 1e+0 32 1620697_at CF568836 - - 1e+0 At3g13857 unknown protein C.G. S.X.
0.02 1e+0 32 1620802_at CB976446 similar to putative pyruvate dehydrogenase E1 alpha subunit - 3e-89 At1g01090 PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA) C.G. S.X.
0.03 1e+0 32 1618176_at CB836281 - - 2e+0 At1g65170 ubiquitin carboxyl-terminal hydrolase family protein C.G. S.X.
0.01 1e+0 32 1618004_s_at CB339217 AlaT1 - 2e-110 At1g70580 AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2) C.G. S.X.
0.03 1e+0 32 1617687_at CB981123 hypothetical protein LOC100265217 - 4e-1 At4g00310 EDA8 (EMBRYO SAC DEVELOPMENT ARREST 8) C.G. S.X.
0.03 1e+0 32 1614402_at CB836281 - - 2e+0 At1g65170 ubiquitin carboxyl-terminal hydrolase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 2e-5 50 Arabidopsis thaliana At4g27700 828884 rhodanese-like domain-containing protein F:molecular_function unknown;P:aging;C:chloroplast thylakoid membrane, chloroplast;BPOA - - - C.G. S.X.
0.37 6e-46 184 Glycine max Gma.11860.2.S1_at BE802446 - - 3e-17 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
0.20 7e-28 123 Hordeum vulgare Contig7298_at Contig7298 - - 6e-13 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
0.14 3e-24 113 Oryza sativa Os09g0530000 AK062568.1 - Rhodanese-like domain containing protein 2e-7 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
0.28 1e-84 313 Populus trichocarpa PtpAffx.5585.1.S1_at CV280308 hypothetical protein - 3e-24 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
0.21 9e-29 127 Triticum aestivum Ta.26822.1.A1_at CD491337 - - 2e-8 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
0.17 4e-29 127 Zea mays Zm.8887.1.A1_at BM336157 rhodanese-like domain containing protein - 1e-7 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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