Gene omics information

Query gene ID 1609380_x_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6384.31609380_x_atCF203033.1--8e-10At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)S.X.H.G.
0.8895.41614054_atCF206745.1--4e-47At2g27960CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1)S.X.H.G.
0.8895.41618907_x_atCF202612.1--4e+0At5g17470calmodulin-related protein, putativeS.X.H.G.
0.8093.61615753_atCF207576--2e-11At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)S.X.H.G.
0.8093.61616230_x_atCF202354.1--2e+1At5g43510-S.X.H.G.
0.6787.91608322_x_atCF205688.1--7e-1At5g10890myosin heavy chain-relatedS.X.H.G.
0.5879.81609907_x_atCF201896.1--8e+0At5g50345-S.X.H.G.
0.5273.91620380_x_atCF203025.1--1e-1At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.399.6GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49
8.799.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51
8.799.5GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50
8.299.4GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55
8.199.4GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67
7.999.3GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56
7.999.3GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37
7.899.3GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57
7.499.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69
7.399.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.571e-923371617102_atCF202285.1--2e-12At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.813e-742761619608_atCF202280.1--2e-19At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.303e-742761613936_x_atCF568996--8e-24At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.813e-742761612848_x_atCF202280.1--2e-19At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.263e-652461616847_s_atCA816751hypothetical protein LOC100267942-2e-12At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.255e-642421610124_atCA816957hypothetical protein LOC100267942-7e-12At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.574e-552121618020_x_atCB972570hypothetical protein LOC100267942-8e-4At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.646e-481881620380_x_atCF203025.1--1e-1At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.664e-371531616430_atCA810723--2e-7At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.128e-1063Arabidopsis thalianaAt5g38410833828ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)F:ribulose-bisphosphate carboxylase activity;P:response to blue light, carbon utilization by fixation of carbon dioxide, response to red light, response to far red light;C:in 8 components;POB---C.G.S.X.
0.093e-446Glycine maxGma.289.1.S1_x_atAF303941.1ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 /// ribulose-1,5-bisphosphate carboxylase small subunit /// ribulose-1,5-bisphosphate carboxylase small subunit-7e-34At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.059e-236Hordeum vulgareHM09E06r_atHM09E06r--9e-10At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.026e+032Oryza sativaOs05g05201009633.m04144-MPPN domain containing protein1e-1At1g32100PRR1 (PINORESINOL REDUCTASE 1)C.G.S.X.
0.084e-342Populus trichocarpaPtpAffx.249.412.A1_atCV282939--7e-34At3g5343060S ribosomal protein L12 (RPL12B)C.G.S.X.
0.081e-240Triticum aestivumTa.27923.2.S1_x_atCK212552small subunit-3e-14At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.055e+030Zea maysZm.8881.1.S1_atBM056113Hypothetical protein LOC100192858-2e+0At3g25545unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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