Gene omics information

Query gene ID 1609313_at
Gene name similar to 2-oxo acid dehydrogenase, lipoyl-binding site
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.91609313_atCF403611similar to 2-oxo acid dehydrogenase, lipoyl-binding site-6e-2At4g22320unknown proteinS.X.H.G.
0.5779.81617194_atBQ794485hypothetical protein LOC100264514-5e-1At5g37520unknown proteinS.X.H.G.
0.5072.71614871_s_atCF404051hypothetical protein LOC100266189-7e-5At4g32551LUG (LEUNIG)S.X.H.G.
0.4464.11607079_atBQ797339hypothetical protein LOC100263131-2e+0At3g56490zinc-binding protein, putative / protein kinase C inhibitor, putativeS.X.H.G.
0.4361.51612817_atCB002820hypothetical protein LOC100267132-3e-1At3g62330zinc knuckle (CCHC-type) family proteinS.X.H.G.
0.4158.71610845_atCF208629hypothetical protein LOC100245365-2e+0At1g68030PHD finger protein-relatedS.X.H.G.
0.4158.71612995_atCD012259--4e-18At3g13340WD-40 repeat family proteinS.X.H.G.
0.4057.71618681_atBQ797518hypothetical protein LOC100241923-1e-30At1g49760PAB8 (POLY(A) BINDING PROTEIN 8)S.X.H.G.
0.3751.71608241_atCD798818hypothetical protein LOC100251333-1e-15At5g06000EIF3G2S.X.H.G.
0.3650.71616840_atCF608637hypothetical protein LOC100255499-9e-15At1g09140SF2/ASF-like splicing modulator (SRP30)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
2.692.5GSM147701Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation30
2.390.7GSM147683Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation12
2.390.7GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10
2.289.9GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.189.1GSM147682Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation11
2.189.1GSM147699Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation28
2.088.2GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4
1.987.2GSM436385Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.987.2GSM147680Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation9
1.987.2GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-1341617732_atCF210335hypothetical protein LOC100262164-1e+0At2g47530-C.G.S.X.
0.031e+0321622376_atCD719388--3e-1At2g14095unknown proteinC.G.S.X.
0.021e+0321614290_atCB342951hypothetical protein LOC100253525-1e-73At3g48420haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.021e+0321612863_atCB913941--3e-30At5g16820HSF3 (HEAT SHOCK FACTOR 3)C.G.S.X.
0.031e+0321609742_atCD719388--3e-1At2g14095unknown proteinC.G.S.X.
0.031e+0321609303_atCB982393hypothetical protein LOC100266613-1e+0At4g20470unknown proteinC.G.S.X.
0.021e+0321609088_atCF603820hypothetical protein LOC100254514-3e-30At5g16820HSF3 (HEAT SHOCK FACTOR 3)C.G.S.X.
0.031e+0321607356_atCB911288UPF0497 membrane protein 7-2e+0At1g31580ECS1C.G.S.X.
0.031e+0321607240_atCF210129hypothetical protein LOC100257482-1e+0At3g25940transcription factor S-II (TFIIS) domain-containing proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-238Arabidopsis thalianaAt4g22320828327unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMFBPVA---C.G.S.X.
0.096e-652Glycine maxGmaAffx.7196.1.S1_atAW348971--3e+0At5g66055AKRP (ANKYRIN REPEAT PROTEIN)C.G.S.X.
0.047e-340Hordeum vulgareContig16020_atContig16020--2e-1At5g47390myb family transcription factorC.G.S.X.
0.047e+032Oryza sativaOsAffx.5259.1.S1_at---0C.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.954.1.A1_atCV257144hypothetical protein-5e-1At3g16870zinc finger (GATA type) family proteinC.G.S.X.
0.044e+032Triticum aestivumTaAffx.107130.1.S1_atCA705515--4e+0At3g26360unknown proteinC.G.S.X.
0.042e+032Zea maysZmAffx.311.1.A1_atAI670448--2e-1At3g48208-C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage