Gene omics information

Query gene ID	1609313_at
Gene name	similar to 2-oxo acid dehydrogenase, lipoyl-binding site
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1609313_at	CF403611	similar to 2-oxo acid dehydrogenase, lipoyl-binding site	-	6e-2	At4g22320	unknown protein	S.X.	H.G.	Please select
0.57	79.8	1617194_at	BQ794485	hypothetical protein LOC100264514	-	5e-1	At5g37520	unknown protein	S.X.	H.G.	Please select
0.50	72.7	1614871_s_at	CF404051	hypothetical protein LOC100266189	-	7e-5	At4g32551	LUG (LEUNIG)	S.X.	H.G.	Please select
0.44	64.1	1607079_at	BQ797339	hypothetical protein LOC100263131	-	2e+0	At3g56490	zinc-binding protein, putative / protein kinase C inhibitor, putative	S.X.	H.G.	Please select
0.43	61.5	1612817_at	CB002820	hypothetical protein LOC100267132	-	3e-1	At3g62330	zinc knuckle (CCHC-type) family protein	S.X.	H.G.	Please select
0.41	58.7	1610845_at	CF208629	hypothetical protein LOC100245365	-	2e+0	At1g68030	PHD finger protein-related	S.X.	H.G.	Please select
0.41	58.7	1612995_at	CD012259	-	-	4e-18	At3g13340	WD-40 repeat family protein	S.X.	H.G.	Please select
0.40	57.7	1618681_at	BQ797518	hypothetical protein LOC100241923	-	1e-30	At1g49760	PAB8 (POLY(A) BINDING PROTEIN 8)	S.X.	H.G.	Please select
0.37	51.7	1608241_at	CD798818	hypothetical protein LOC100251333	-	1e-15	At5g06000	EIF3G2	S.X.	H.G.	Please select
0.36	50.7	1616840_at	CF608637	hypothetical protein LOC100255499	-	9e-15	At1g09140	SF2/ASF-like splicing modulator (SRP30)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.6	92.5	GSM147701	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	30
2.3	90.7	GSM147683	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	12
2.3	90.7	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
2.2	89.9	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147682	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	11
2.1	89.1	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.0	88.2	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
1.9	87.2	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147680	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	9
1.9	87.2	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	34	1617732_at	CF210335	hypothetical protein LOC100262164	-	1e+0	At2g47530	-	C.G.	S.X.	Please select
0.03	1e+0	32	1622376_at	CD719388	-	-	3e-1	At2g14095	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	32	1614290_at	CB342951	hypothetical protein LOC100253525	-	1e-73	At3g48420	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please select
0.02	1e+0	32	1612863_at	CB913941	-	-	3e-30	At5g16820	HSF3 (HEAT SHOCK FACTOR 3)	C.G.	S.X.	Please select
0.03	1e+0	32	1609742_at	CD719388	-	-	3e-1	At2g14095	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1609303_at	CB982393	hypothetical protein LOC100266613	-	1e+0	At4g20470	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	32	1609088_at	CF603820	hypothetical protein LOC100254514	-	3e-30	At5g16820	HSF3 (HEAT SHOCK FACTOR 3)	C.G.	S.X.	Please select
0.03	1e+0	32	1607356_at	CB911288	UPF0497 membrane protein 7	-	2e+0	At1g31580	ECS1	C.G.	S.X.	Please select
0.03	1e+0	32	1607240_at	CF210129	hypothetical protein LOC100257482	-	1e+0	At3g25940	transcription factor S-II (TFIIS) domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	6e-2	38	Arabidopsis thaliana	At4g22320	828327	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;OMFBPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	6e-6	52	Glycine max	GmaAffx.7196.1.S1_at	AW348971	-	-	3e+0	At5g66055	AKRP (ANKYRIN REPEAT PROTEIN)	C.G.	S.X.	Please select
0.04	7e-3	40	Hordeum vulgare	Contig16020_at	Contig16020	-	-	2e-1	At5g47390	myb family transcription factor	C.G.	S.X.	Please select
0.04	7e+0	32	Oryza sativa	OsAffx.5259.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+0	34	Populus trichocarpa	PtpAffx.954.1.A1_at	CV257144	hypothetical protein	-	5e-1	At3g16870	zinc finger (GATA type) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	32	Triticum aestivum	TaAffx.107130.1.S1_at	CA705515	-	-	4e+0	At3g26360	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	32	Zea mays	ZmAffx.311.1.A1_at	AI670448	-	-	2e-1	At3g48208	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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