Gene omics information

Query gene ID	1609196_at
Gene name	hypothetical protein LOC100256073
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.43	61.5	1609196_at	BQ792412	hypothetical protein LOC100256073	-	3e-1	At3g14020	NF-YA6 (NUCLEAR FACTOR Y, SUBUNIT A6)	S.X.	H.G.	Please select
0.73	90.8	1621697_at	CF207483	hypothetical protein LOC100247318	-	1e+0	At5g57440	GS1	S.X.	H.G.	Please select
0.71	89.5	1620001_at	CF207174	hypothetical protein LOC100244517	-	2e+0	At4g29283	LCR21 (Low-molecular-weight cysteine-rich 21)	S.X.	H.G.	Please select
0.71	89.5	1613965_at	CF210779	hypothetical protein LOC100267561	-	1e-18	At3g04740	SWP (STRUWWELPETER)	S.X.	H.G.	Please select
0.63	84.3	1607533_at	CD801397	hypothetical protein LOC100263447	-	1e-5	At3g54670	TTN8 (TITAN8)	S.X.	H.G.	Please select
0.42	60.1	1619646_at	CB341424	hypothetical protein LOC100261680	-	4e+0	At5g43960	nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select
0.40	57.7	1607033_at	CD799937	hypothetical protein LOC100259729	-	4e-1	At3g30247	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.8	99.7	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
10.7	99.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
10.6	99.7	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
10.3	99.6	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
8.6	99.5	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
8.6	99.5	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
7.5	99.2	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
7.1	99.1	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
6.7	99.0	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
6.7	99.0	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-1	34	1621843_at	CB349223	hypothetical protein LOC100266185	-	3e-19	At4g01560	MEE49 (maternal effect embryo arrest 49)	C.G.	S.X.	Please select
0.03	3e-1	34	1616330_at	CF208809	-	-	4e+0	At5g41761	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1617682_at	CD720792	-	-	1e+0	At4g10870	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	32	1615092_at	CB349360	similar to ring domain containing protein	-	1e-8	At4g03510	RMA1	C.G.	S.X.	Please select
0.03	1e+0	32	1614347_at	CF513585	hypothetical protein LOC100250375	-	1e-1	At4g20290	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1613859_at	CD720792	-	-	1e+0	At4g10870	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1613271_at	CB913347	-	-	5e+0	At5g25240	-	C.G.	S.X.	Please select
0.02	1e+0	32	1612153_at	CA817275	hypothetical protein LOC100254186	-	7e+0	At5g39700	MYB89 (myb domain protein 89)	C.G.	S.X.	Please select
0.02	1e+0	32	1609918_at	CF414641	hypothetical protein LOC100259885	-	1e-1	At3g55460	SCL30	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	36	Arabidopsis thaliana	At3g14020	820616	NF-YA6 (NUCLEAR FACTOR Y, SUBUNIT A6)	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:CCAAT-binding factor complex, nucleus, chloroplast;PMFO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	Gma.12483.1.A1_at	CD393502	-	-	6e-1	At1g67950	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.04	3e-2	38	Hordeum vulgare	HVSMEg0011N18r2_at	HVSMEg0011N18r2	-	-	6e-2	At1g13607	-	C.G.	S.X.	Please select
0.03	1e-1	38	Oryza sativa	Os11g0581000	9639.m03358	-	-	1e-1	At2g40240	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+0	34	Populus trichocarpa	PtpAffx.218550.1.S1_s_at	pmrna34210	hypothetical protein	-	7e-3	At5g23760	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e-1	36	Triticum aestivum	Ta.10670.1.A1_at	BQ166237	-	-	3e+0	At4g21740	unknown protein	C.G.	S.X.	Please select
0.03	3e-2	38	Zea mays	Zm.6838.1.A1_at	CF035294	-	-	4e-1	Atcg00440	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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