Gene omics information

Query gene ID 1609191_s_at
Gene name hypothetical protein LOC100258056
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81609191_s_atCB978023hypothetical protein LOC100258056-0At5g26751ATSK11S.X.H.G.
0.7792.31606368_s_atCF208516actin 1-0At5g09810ACT7 (ACTIN 7)S.X.H.G.
0.7792.3AFFX-Vvi-actin-3_s_at-actin 1-0S.X.H.G.
0.7189.5AFFX-Vvi-actin-3_c6_s_at-actin 1-0S.X.H.G.
0.6787.9AFFX-Vvi-actin-3_c7_s_at-actin 1-0S.X.H.G.
0.5577.31611412_atCF517248hypothetical protein LOC100244694-2e+0At5g37480unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1.886.0GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72
1.784.7GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48
1.784.7GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59
1.683.3GSM147731Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation60
1.683.3GSM436415V. riparia (VR, PI588259) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.683.3GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71
1.683.3GSM436379Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.683.3GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45
1.683.3GSM436421V. riparia (VR, PI588259) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.683.3GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.392e-1254481618465_atCB918507hypothetical protein LOC100252099-2e-39At5g14640SK13 (SHAGGY-LIKE KINASE 13)C.G.S.X.
0.203e-471881622161_atCB982729hypothetical protein LOC100252299-3e-101At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)C.G.S.X.
0.182e-421731620375_atCA814054hypothetical protein LOC100252099-3e-13At3g05840ATSK12C.G.S.X.
0.291e-401671621171_atCF568972--2e-85At5g14640SK13 (SHAGGY-LIKE KINASE 13)C.G.S.X.
0.214e-281251615576_atCB970198--1e-147At1g09840ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)C.G.S.X.
0.202e-241131622824_atBQ794106hypothetical protein LOC100266096-5e-73At4g00720ATSK32 (SHAGGY-LIKE PROTEIN KINASE 32)C.G.S.X.
0.196e-241111612428_atBQ798883similar to shaggy-related protein kinase delta / ASK-delta / ASK-dzeta (ASK4)-2e-81At4g18710BIN2 (BRASSINOSTEROID-INSENSITIVE 2)C.G.S.X.
0.148e-14771606811_atBQ797419hypothetical protein LOC100241198-5e-123At2g30980ASKdZeta (Arabidopsis SHAGGY-related protein kinase dZeta)C.G.S.X.
0.017e-2381621342_atCF206330.1--2e-3At5g38710proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.530638Arabidopsis thalianaAt5g26751832733ATSK11encodes a SHAGGY-related kinase involved in meristem organization.---C.G.S.X.
0.560882Glycine maxGma.11129.1.S1_atBE657610--6e-119At3g05840ATSK12C.G.S.X.
0.443e-135482Hordeum vulgareContig5540_atContig5540--1e-52At3g05840ATSK12C.G.S.X.
0.405e-112406Oryza sativaOs01g0252100AK068737.1-Glycogen synthase kinase-3 homolog MsK-3 (EC2.7.1.-)1e-49At5g14640SK13 (SHAGGY-LIKE KINASE 13)C.G.S.X.
0.5901025Populus trichocarpaPtp.4916.1.S1_s_atCV270159hypothetical protein-6e-165At5g26751ATSK11C.G.S.X.
0.424e-114412Triticum aestivumTa.3003.1.S1_x_atBE398996--3e-44At5g26751ATSK11C.G.S.X.
0.394e-115414Zea maysZm.6802.2.S1_atAI612473glycogen synthase kinase-3 MsK-3-2e-42At5g14640SK13 (SHAGGY-LIKE KINASE 13)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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