Gene omics information

Query gene ID	1609184_at
Gene name	hypothetical protein LOC100254366
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1609184_at	CB342124	hypothetical protein LOC100254366	-	7e-6	At3g14640	CYP72A10	S.X.	H.G.	Please select
0.83	94.6	1616555_s_at	CB343780	-	-	1e+1	At4g35165	unknown protein	S.X.	H.G.	Please select
0.83	94.6	1619578_at	CB342051	hypothetical protein LOC100254366 /// hypothetical protein LOC100258319 /// hypothetical protein LOC100267392	-	6e-3	At3g14620	CYP72A8	S.X.	H.G.	Please select
0.53	75.2	1617035_s_at	CF205538.1	hypothetical protein LOC100260266	-	1e-10	At2g47180	AtGolS1 (Arabidopsis thaliana galactinol synthase 1)	S.X.	H.G.	Please select
0.53	75.2	1614381_at	CD713830	-	-	9e+0	At5g54930	AT hook motif-containing protein	S.X.	H.G.	Please select
0.47	67.7	1608907_s_at	CA809004	hypothetical protein LOC100260266	-	1e-30	At1g60470	AtGolS4 (Arabidopsis thaliana galactinol synthase 4)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
24.9	100.0	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
22.8	100.0	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
20.0	99.9	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
18.3	99.9	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
17.5	99.9	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
15.5	99.9	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
12.7	99.8	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
9.3	99.6	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
8.4	99.4	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
7.5	99.2	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.64	0	797	1619325_at	CF211836	hypothetical protein LOC100263459	-	6e-4	At3g14660	CYP72A13	C.G.	S.X.	Please select
0.63	5e-155	545	1617087_at	CF202027.1	hypothetical protein LOC100245388	-	5e+0	At5g45550	mob1/phocein family protein	C.G.	S.X.	Please select
0.53	1e-121	434	1608003_s_at	CF405160	hypothetical protein LOC100245388	-	4e+0	At5g63225	-	C.G.	S.X.	Please select
0.05	5e-4	44	1614070_at	CF214262	hypothetical protein LOC100247788	-	4e-3	At3g14630	CYP72A9	C.G.	S.X.	Please select
0.04	5e-4	44	1609166_at	CF517180	hypothetical protein LOC100249305	-	7e-3	At3g14630	CYP72A9	C.G.	S.X.	Please select
0.02	2e+0	32	1611131_at	CB971811	hypothetical protein LOC100246779	-	1e-23	At2g40280	dehydration-responsive family protein	C.G.	S.X.	Please select
0.03	2e+0	32	1608378_at	CB346353	-	-	2e-1	At2g41410	calmodulin, putative	C.G.	S.X.	Please select
0.02	7e+0	30	1622250_at	CD721386	-	-	1e+0	At4g16780	ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2)	C.G.	S.X.	Please select
0.02	7e+0	30	1621943_at	CB344051	hypothetical protein LOC100245848	-	3e-8	At3g17930	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e-6	52	Arabidopsis thaliana	At3g14640	820692	CYP72A10	putative cytochrome P450	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.21	1e-20	101	Glycine max	Gma.7159.1.A1_at	BU545176	-	-	1e+0	At3g14690	CYP72A15	C.G.	S.X.	Please select
0.04	2e-1	36	Hordeum vulgare	HV_CEb0004J20f_s_at	HV_CEb0004J20f	-	-	2e+0	At5g63634	unknown protein	C.G.	S.X.	Please select
0.04	3e-3	44	Oryza sativa	Os01g0602400	AK107349.1	-	Cytochrome P450 monooxygenase CYP72A5 (Fragment)	6e-2	At3g14650	CYP72A11	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.16	7e-25	115	Populus trichocarpa	PtpAffx.30957.1.A1_at	CV254817	-	-	1e-9	At3g14640	CYP72A10	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	1e-1	38	Triticum aestivum	Ta.5901.3.S1_x_at	CA609571	-	-	4e+0	At5g21010	ATBPM5 (BTB-POZ and MATH domain 5)	C.G.	S.X.	Please select
0.03	4e-5	48	Zea mays	Zm.9289.1.A1_at	BM267824	-	-	1e-6	At3g14680	CYP72A14	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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