CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1609022_at

Gene name hypothetical protein LOC100250008

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 94.6 1609022_at CF371738 hypothetical protein LOC100250008 - 1e+0 At4g13690 unknown protein S.X. H.G.
0.57 79.8 1610370_s_at CB975555 hypothetical protein LOC100243953 - 1e+0 At5g22430 unknown protein S.X. H.G.
0.46 66.5 1617350_at CB975555 hypothetical protein LOC100243953 - 1e+0 At5g22430 unknown protein S.X. H.G.
0.36 50.7 1619687_at CD798741 hypothetical protein LOC100242388 - 2e+0 At5g53880 unknown protein S.X. H.G.
0.19 20.9 1616858_at BQ798567 hypothetical protein LOC100252226 /// hypothetical protein LOC100254728 - 4e-3 At3g12740 ALIS1 (ALA-INTERACTING SUBUNIT 1) S.X. H.G.
0.10 10.3 1620673_at BQ797073 hypothetical protein LOC100267988 - 5e-73 At2g01140 fructose-bisphosphate aldolase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.8 97.8 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.2 97.1 GSM287873 Green hard berry B9 from plant 2 cluster proximal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
3.2 94.9 GSM436359 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.7 93.0 GSM436412 V. riparia (VR, PI588259) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.7 93.0 GSM436380 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.7 93.0 GSM287882 Green soft berry A21 from plant 1 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
2.6 92.5 GSM287869 Green hard berry C3 from plant 1 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.6 92.5 GSM287866 Green hard berry B21 from plant 1 cluster proximal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.5 91.9 GSM436395 V. riparia (VR, PI588259) LD, 15h 7 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-1 34 1611074_at CF212362 hypothetical protein LOC100247256 - 2e-6 At2g33510 protein binding C.G. S.X.
0.02 4e-1 34 1608765_at CB980590 hypothetical protein LOC100243711 - 1e-10 At3g51010 unknown protein C.G. S.X.
0.03 2e+0 32 1619818_at CB345219 - - 2e+0 At3g47140 F-box family protein-related C.G. S.X.
0.03 2e+0 32 1617894_at CF512097 - - 2e+0 At5g48175 unknown protein C.G. S.X.
0.03 2e+0 32 1613535_at CD799741 hypothetical protein LOC100264394 - 2e-25 At5g04510 PDK1 (3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1) C.G. S.X.
0.02 2e+0 32 1610943_at CD008330 - - 3e-1 At3g27680 self-incompatibility protein-related C.G. S.X.
0.02 2e+0 32 1610054_at CA818489 hypothetical LOC100243179 - 1e-1 At3g25573 unknown protein C.G. S.X.
0.03 2e+0 32 1607893_at CF404786 - - 4e+0 At5g51830 pfkB-type carbohydrate kinase family protein C.G. S.X.
0.02 2e+0 32 1607100_at CD008330 - - 3e-1 At3g27680 self-incompatibility protein-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 34 Arabidopsis thaliana At4g13690 827003 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBM - - - C.G. S.X.
0.03 2e+0 34 Glycine max GmaAffx.93592.1.S1_x_at CF809317 - - 3e-12 At5g19855 unknown protein C.G. S.X.
0.03 1e+1 30 Hordeum vulgare HM05A10r_at HM05A10r - - 1e+1 At4g25950 VATG3 (vacuolar ATP synthase G3) C.G. S.X.
0.03 3e+0 34 Oryza sativa OsAffx.24152.1.S1_at - - - 0 C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.37275.1.A1_at CV258363 - - 4e+0 At4g09580 - C.G. S.X.
0.03 4e-1 36 Triticum aestivum Ta.11469.1.S1_s_at AJ610882 - - 6e-2 At1g77330 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative C.G. S.X.
0.03 9e+0 30 Zea mays ZmAffx.589.1.A1_at AI715017 - - 8e-1 At5g53880 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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