Gene omics information

Query gene ID 1608888_at
Gene name hypothetical protein LOC100258013
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5072.71608888_atCF208466hypothetical protein LOC100258013-2e-13At4g25130peptide methionine sulfoxide reductase, putativeS.X.H.G.
0.7792.31619593_atCF215832hypothetical protein LOC100255022-2e-11At3g17210HS1 (HEAT STABLE PROTEIN 1)S.X.H.G.
0.6787.91615282_s_atCB345099hypothetical protein LOC100261311-2e-21At3g16570RALFL23 (ralf-like 23)S.X.H.G.
0.4057.71616496_atCB975515--3e-5At4g23710VAG2S.X.H.G.
0.3650.71615628_atCB345697hypothetical protein LOC100244782-5e-1At4g10080unknown proteinS.X.H.G.
0.2937.71608991_atCA816013hypothetical protein LOC100255967-8e-11At1g67300hexose transporter, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.398.2GSM287889Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
5.398.2GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
5.398.2GSM287893Pink soft berry C12 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
5.198.1GSM287892Pink soft berry C11 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
4.997.9GSM287895Pink soft berry B13 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
4.797.7GSM287891Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
4.797.7GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
4.697.6GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
4.597.5GSM287884Green soft berry C7 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
4.597.5GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.132e-7561608700_atCB342479--4e+0At3g04900heavy-metal-associated domain-containing proteinC.G.S.X.
0.122e-4461607361_atCB978315hypothetical protein LOC100255310-5e-4At4g25130peptide methionine sulfoxide reductase, putativeC.G.S.X.
0.007e-1341620102_atCF514700--0Atcg00540-C.G.S.X.
0.027e-1341617322_atBQ796754--2e+0At5g66700HB53C.G.S.X.
0.027e-1341616823_atCF608764hypothetical protein LOC100257426-6e-7At3g21175ZML1 (ZIM-LIKE 1)C.G.S.X.
0.027e-1341616159_x_atCF206571.1--2e-24At1g08200AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2)C.G.S.X.
0.007e-1341615099_s_atCB970583hypothetical protein LOC100242764 /// similar to cytochrome f-0Atcg00540-C.G.S.X.
0.027e-1341614681_atCF206571.1--2e-24At1g08200AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2)C.G.S.X.
0.017e-1341613364_atCD720561hypothetical protein LOC100254952-3e-71At3g14270phosphatidylinositol-4-phosphate 5-kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.282e-1377Arabidopsis thalianaAt4g25130828616peptide methionine sulfoxide reductase, putativeF:peptide-methionine-(S)-S-oxide reductase activity, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor;P:protein modification process, protein metabolic process;C:chloroplast stroma, chloroplast;OBMPFAV---C.G.S.X.
0.222e-50200Glycine maxGma.1655.1.S1_atCD406162--3e-21At5g07470PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3)C.G.S.X.
0.075e-652Hordeum vulgareContig7267_atContig7267--1e-3At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)C.G.S.X.
0.186e-1583Oryza sativaOs10g0563600AK109715.1-Peptide methionine sulfoxide reductase (EC1.8.4.6) (Protein- methionine-S-oxide reductase) (PeptideMet(O) reductase)2e-1At3g47550zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.253e-56220Populus trichocarpaPtp.925.1.A1_atCK089498methionine sulfoxide reductase type-5e-10At4g25130peptide methionine sulfoxide reductase, putativeC.G.S.X.
0.053e-654Triticum aestivumTa.8368.1.S1_atCK207647--2e+0At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)C.G.S.X.
0.155e-1271Zea maysZm.13703.1.A1_atCF007380peptide methionine sulfoxide reductase-9e-3At5g61640PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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