CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1608770_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 81.9 1608770_at CF211789 - - 6e-21 At3g60620 phosphatidate cytidylyltransferase family protein S.X. H.G.
0.77 92.3 1607166_at CF517014 hypothetical protein LOC100254901 - 2e+1 Atmg00730 - S.X. H.G.
0.77 92.3 1613951_at CF404624 hypothetical protein LOC100242676 - 1e-13 At3g06350 MEE32 (MATERNAL EFFECT EMBRYO ARREST 32) S.X. H.G.
0.60 81.9 1619028_at CF205704.1 hypothetical protein LOC100248919 - 3e-26 At3g60620 phosphatidate cytidylyltransferase family protein S.X. H.G.
0.55 77.3 1617241_at CD719816 hypothetical protein LOC100254322 - 5e+0 At5g48530 unknown protein S.X. H.G.
0.44 64.1 1614839_s_at CB978167 hypothetical protein LOC100251023 - 3e-10 At1g04290 thioesterase family protein S.X. H.G.
0.36 50.7 1608447_at CB913704 hypothetical protein LOC100244219 - 3e-1 At3g44620 protein tyrosine phosphatase S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.0 94.2 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
3.0 94.2 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
2.9 93.8 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
2.7 93.0 GSM147734 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 63
2.6 92.5 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
2.6 92.5 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
2.5 91.9 GSM147733 Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation 62
2.5 91.9 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
2.5 91.9 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
2.5 91.9 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.95 0 1104 1613457_s_at CF211789 hypothetical protein LOC100248919 - 6e-21 At3g60620 phosphatidate cytidylyltransferase family protein C.G. S.X.
0.69 0 825 1619028_at CF205704.1 hypothetical protein LOC100248919 - 3e-26 At3g60620 phosphatidate cytidylyltransferase family protein C.G. S.X.
0.03 9e-2 36 1618961_at CD801645 - - 1e+0 At2g35612 - C.G. S.X.
0.03 3e-1 34 1620715_at CD720282 - - 1e+0 At5g44920 Toll-Interleukin-Resistance (TIR) domain-containing protein C.G. S.X.
0.03 3e-1 34 1619901_at BQ794318 hypothetical protein LOC100258001 - 4e+0 At5g42410 auxin-responsive family protein C.G. S.X.
0.03 3e-1 34 1608109_at CD720282 - - 1e+0 At5g44920 Toll-Interleukin-Resistance (TIR) domain-containing protein C.G. S.X.
0.03 1e+0 32 1612642_at CB970994 hypothetical protein LOC100244706 - 5e+0 At3g43570 GDSL-motif lipase, putative C.G. S.X.
0.03 1e+0 32 1609231_at BQ795340 - - 2e-11 At4g08390 SAPX (STROMAL ASCORBATE PEROXIDASE) C.G. S.X.
0.03 1e+0 32 1608098_at BQ799852 hypothetical protein LOC100257092 - 2e-5 At1g60160 potassium transporter family protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 6e-21 101 Arabidopsis thaliana At3g60620 825233 phosphatidate cytidylyltransferase family protein F:phosphatidate cytidylyltransferase activity, transferase activity, transferring phosphorus-containing groups;P:phospholipid biosynthetic process;C:chloroplast, membrane, chloroplast envelope;BOMFP - - - C.G. S.X.
0.04 3e-2 40 Glycine max HgAffx.15176.1.S1_at CB378503 - - 4e+0 At4g16780 ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2) C.G. S.X.
0.06 4e-5 48 Hordeum vulgare Contig13804_at Contig13804 - - 2e-13 At2g45150 phosphatidate cytidylyltransferase family protein C.G. S.X.
0.02 6e-1 36 Oryza sativa Os.7669.1.S1_at - - - 0 C.G. S.X.
0.04 3e-2 40 Populus trichocarpa Ptp.7105.1.S1_s_at DN503246 hypothetical protein - 5e-3 At1g61740 unknown protein C.G. S.X.
0.04 5e+0 32 Triticum aestivum Ta.15900.1.S1_at CA500144 - - 1e-1 At1g46480 WOX4 (WUSCHEL RELATED HOMEOBOX 4) C.G. S.X.
0.04 2e+0 32 Zea mays ZmAffx.433.1.A1_at AI676948 - - 2e-1 At4g25890 60S acidic ribosomal protein P3 (RPP3A) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage