Gene omics information

Query gene ID	1608769_at
Gene name	hypothetical protein LOC100253272
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.46	66.5	1608769_at	BM437199	hypothetical protein LOC100253272	-	5e+0	At5g44306	unknown protein	S.X.	H.G.	Please select
0.67	87.9	1607729_at	CB981291	hypothetical protein LOC100247347	-	1e+0	At1g52857	unknown protein	S.X.	H.G.	Please select
0.56	79.4	1615704_at	CB970180	hypothetical protein LOC100253600	-	9e-5	At3g22180	zinc finger (DHHC type) family protein	S.X.	H.G.	Please select
0.50	72.7	1614475_at	CF609346	hypothetical protein LOC100263178	-	9e-18	At5g43930	transducin family protein / WD-40 repeat family protein	S.X.	H.G.	Please select
0.48	68.8	1621304_at	CF415169	hypothetical protein LOC100250891	-	3e+0	At5g66170	-	S.X.	H.G.	Please select
0.40	57.7	1616391_s_at	CD802476	hypothetical protein LOC100261930	-	3e-51	At2g27960	CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1)	S.X.	H.G.	Please select
0.36	50.7	1617299_at	CD801559	hypothetical protein LOC100249941	-	3e-31	At2g46225	ABIL1 (Abi-1-like 1)	S.X.	H.G.	Please select
0.35	48.5	1612192_s_at	CF518716	similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase	-	8e-86	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.2	94.9	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
3.1	94.6	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
3.0	94.2	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
2.9	93.8	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.8	93.4	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
2.5	91.9	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
2.3	90.7	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
2.3	90.7	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
2.2	89.9	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.1	89.1	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e-1	36	1608569_s_at	CB968887	similar to Hsp70 interacting protein/thioredoxin chimera	-	1e-6	At4g22670	AtHip1 (Arabidopsis thaliana Hsp70-interacting protein 1)	C.G.	S.X.	Please select
0.03	4e-1	34	1616874_at	CF415286	-	-	2e-18	At5g58250	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	32	1615909_s_at	CF518671	hypothetical protein LOC100255269	-	2e-17	At5g58350	WNK4 (WITH NO K (=LYSINE) 4)	C.G.	S.X.	Please select
0.02	2e+0	32	1614004_at	CB969947	hypothetical protein LOC100267905	-	4e-13	At4g33060	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	C.G.	S.X.	Please select
0.02	2e+0	32	1611240_at	CD713010	-	-	1e+0	At1g58245	-	C.G.	S.X.	Please select
0.02	2e+0	32	1607433_at	CD713010	-	-	1e+0	At1g58245	-	C.G.	S.X.	Please select
0.03	6e+0	30	1621545_at	CB977883	hypothetical protein LOC100266544	-	6e-5	At5g13270	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.02	6e+0	30	1621511_at	CF212324	hypothetical protein LOC100263809	-	2e+0	At2g17710	unknown protein	C.G.	S.X.	Please select
0.02	6e+0	30	1621655_at	CA817336	hypothetical protein LOC100243738	-	3e-2	At5g51670	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	5e+0	32	Arabidopsis thaliana	At5g44306	6241118	unknown protein	F:unknown;P:unknown;C:unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.20	5e-10	65	Glycine max	Gma.4165.1.S1_at	BI969143	-	-	2e+0	At1g01730	unknown protein	C.G.	S.X.	Please select
0.03	1e+1	30	Hordeum vulgare	HC04H04_T3_at	HC04H04_T3	-	-	2e+0	At1g01730	unknown protein	C.G.	S.X.	Please select
0.04	2e-1	38	Oryza sativa	OsAffx.13513.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.15	6e-19	95	Populus trichocarpa	Ptp.5820.1.S1_s_at	AI162892	hypothetical protein	-	1e-4	At4g13640	UNE16 (unfertilized embryo sac 16)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	5e+0	32	Triticum aestivum	TaAffx.23353.1.S1_at	CA736163	-	-	2e+0	At4g28068	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	Zea mays	Zm.17446.1.A1_at	CK347991	hypothetical protein LOC100191157	-	2e-3	At3g13430	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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