Gene omics information

Query gene ID	1608705_at
Gene name	hypothetical protein LOC100242998
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1608705_at	CB972390	hypothetical protein LOC100242998	-	7e-5	At2g43820	UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2)	S.X.	H.G.	Please select
0.44	64.1	1609351_at	CB975231	-	-	3e-1	At5g14360	ubiquitin family protein	S.X.	H.G.	Please select
0.14	14.4	1610643_at	CF414908	hypothetical LOC100247156	-	3e+0	At3g57930	unknown protein	S.X.	H.G.	Please select
0.05	6.0	1607298_a_at	CF372301	hypothetical protein LOC100243721	-	5e-1	At3g57958	unknown protein	S.X.	H.G.	Please select
0.02	3.2	1608182_at	CB346881	hypothetical protein LOC100251229	-	1e-10	At4g35550	WOX13 (WUSCHEL-RELATED HOMEOBOX 13)	S.X.	H.G.	Please select
0.02	3.2	1617666_a_at	CF512265	hypothetical protein LOC100260025	-	6e-2	At5g54360	zinc finger (C2H2 type) family protein-related	S.X.	H.G.	Please select
0.02	3.2	1611335_at	BM437755	hypothetical protein LOC100265633	-	2e-30	At5g12470	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.6	99.5	GSM436379	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
6.8	99.0	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.6	98.4	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.3	98.2	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.8	97.8	GSM436359	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.4	97.3	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.2	97.1	GSM436383	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436384	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.9	96.6	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	2e-8	57	1618457_at	CF205125.1	-	-	1e-4	At1g07250	UGT71C4 (UDP-GLUCOSYL TRANSFERASE 71C4)	C.G.	S.X.	Please select
0.05	2e-2	38	1618112_at	CB971725	hypothetical protein LOC100264656	-	6e-2	At5g03490	UDP-glucoronosyl/UDP-glucosyl transferase family protein	C.G.	S.X.	Please select
0.04	8e-2	36	1620232_at	CD005509	-	-	1e+0	At5g67060	HEC1 (HECATE 1)	C.G.	S.X.	Please select
0.04	8e-2	36	1616445_at	CD716014	hypothetical protein LOC100262839	-	1e+0	At5g67060	HEC1 (HECATE 1)	C.G.	S.X.	Please select
0.03	8e-2	36	1607306_at	CB980890	hypothetical protein LOC100255528	-	1e+0	At4g01895	systemic acquired resistance (SAR) regulator protein NIMIN-1-related	C.G.	S.X.	Please select
0.02	3e-1	34	1618158_at	CB919503	hypothetical protein LOC100264247	-	2e+0	At4g35720	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	32	1617423_at	CB969252	hypothetical protein LOC100245065	-	5e-8	At1g10360	ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18)	C.G.	S.X.	Please select
0.02	1e+0	32	1614006_at	CF510542	-	-	7e+0	At5g37760	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select
0.01	5e+0	30	1620195_at	CB347615	hypothetical protein LOC100254082	-	4e-33	At1g76010	nucleic acid binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	7e-5	48	Arabidopsis thaliana	At2g43820	818986	UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2)	Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.56300.1.S1_at	AW348930	-	-	1e-9	At4g15260	UDP-glucoronosyl/UDP-glucosyl transferase family protein	C.G.	S.X.	Please select
0.04	5e-1	34	Hordeum vulgare	HV_CEb0006N04r2_at	HV_CEb0006N04r2	-	-	2e-8	At2g43820	UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2)	C.G.	S.X.	Please select
0.03	8e-6	52	Oryza sativa	OsAffx.26856.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	1e+0	34	Populus trichocarpa	PtpAffx.89781.1.A1_at	CV254856	hypothetical protein	-	5e-7	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	1e+0	34	Triticum aestivum	TaAffx.7493.1.S1_at	CA657847	-	-	1e+1	At5g38010	UDP-glucoronosyl/UDP-glucosyl transferase family protein	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	ZmAffx.530.2.A1_at	AI668127	hypothetical protein LOC100273219	-	3e+0	At2g17972	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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