Gene omics information

Query gene ID 1608677_at
Gene name hypothetical protein LOC100258930
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4361.51608677_atCB977949hypothetical protein LOC100258930-3e-22At3g19130ATRBP47B (RNA-binding protein 47B)S.X.H.G.
0.6384.31615515_atCF403851hypothetical protein LOC100245136-1e+0At4g03120proline-rich family proteinS.X.H.G.
0.6384.31616072_atCB980955hypothetical protein LOC100267955-3e-5At1g09290unknown proteinS.X.H.G.
0.6183.21608723_atCB977157hypothetical protein LOC100261604-3e-5At5g22040-S.X.H.G.
0.5679.41621535_s_atBQ792471hypothetical protein LOC100247214-6e-87At2g18020EMB2296 (embryo defective 2296)S.X.H.G.
0.5072.71622597_atCF212895hypothetical protein LOC100244242-1e-4At3g43520unknown proteinS.X.H.G.
0.4057.71613658_atCD801951hypothetical protein LOC100244785-4e-4At2g02970nucleoside phosphatase family protein / GDA1/CD39 family proteinS.X.H.G.
0.3345.71616446_atCB978171hypothetical protein LOC100265064-3e-67At2g29140APUM3 (Arabidopsis Pumilio 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.497.3GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.996.6GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.595.7GSM436387Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.194.6GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
3.094.2GSM436408V. riparia (VR, PI588259) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.993.8GSM436385Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.692.5GSM436364Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.692.5GSM436406V. riparia (VR, PI588259) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.692.5GSM436386Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436366Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.4207491620881_atCF568956--3e-4At5g54900ATRBP45A (RNA-binding protein 45A)C.G.S.X.
0.101e-6541613058_a_atCF511255hypothetical protein LOC100250363-9e-9At4g27000ATRBP45CC.G.S.X.
0.024e-3421621324_atCB916399--1e-1At4g27000ATRBP45CC.G.S.X.
0.022e-2401619549_atBQ797192hypothetical protein LOC100250270-1e-3At1g43620UDP-glucose:sterol glucosyltransferase, putativeC.G.S.X.
0.017e-2381621710_atCF201680.1--3e-1At1g59690-C.G.S.X.
0.017e-2381617746_atCF214456hypothetical protein LOC100248500-0At5g17920ATMS1C.G.S.X.
0.023e-1361620962_atCD721498--5e+0At4g35200unknown proteinC.G.S.X.
0.023e-1361617196_atCD721498--5e+0At4g35200unknown proteinC.G.S.X.
0.011e+0341622249_atCA817903glycolate oxidase-like-6e-153At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.233e-22107Arabidopsis thalianaAt3g19130821447ATRBP47B (RNA-binding protein 47B)F:RNA binding;P:unknown;C:unknown;MOPFBAV---C.G.S.X.
0.345e-46186Glycine maxGma.5451.1.S1_atBE822328--1e-15At3g19130ATRBP47B (RNA-binding protein 47B)C.G.S.X.
0.091e-757Hordeum vulgareContig3033_atContig3033--9e-4At1g47500ATRBP47C' (RNA-binding protein 47C')C.G.S.X.
0.143e-1481Oryza sativaOs09g0462700AK067260.1--1e-21At1g47500ATRBP47C' (RNA-binding protein 47C')C.G.S.X.
0.386e-120432Populus trichocarpaPtp.3190.1.S1_s_atCV267181hypothetical protein-5e-14At3g19130ATRBP47B (RNA-binding protein 47B)C.G.S.X.
0.096e-550Triticum aestivumTaAffx.114193.1.S1_atCA611762--1e-10At1g47490ATRBP47C (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47C)C.G.S.X.
0.046e-342Zea maysZm.7649.1.A1_atCF044168RNA-binding post-transcriptional regulator csx1-4e-15At5g19350RNA-binding protein 45 (RBP45), putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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