CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1608653_at

Gene name hypothetical protein LOC100263217

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 81.9 1608653_at CB975644 hypothetical protein LOC100263217 - 5e+0 At4g15020 DNA binding / protein dimerization S.X. H.G.
0.91 98.8 1622765_at CF405914 - - 4e+0 At3g59450 calcium-binding EF hand family protein S.X. H.G.
0.71 89.5 1616867_at CF405655 hypothetical protein LOC100254223 - 2e-17 At3g01090 AKIN10 (Arabidopsis SNF1 kinase homolog 10) S.X. H.G.
0.71 89.5 1617406_s_at CF415339 hypothetical protein LOC100266010 - 2e-8 At3g07220 transcriptional activator, putative S.X. H.G.
0.67 87.9 1617655_at CB348593 hypothetical protein LOC100262391 - 5e-10 At3g16620 ATTOC120 S.X. H.G.
0.60 81.9 1608813_s_at BQ795140 hypothetical protein LOC100255523 - 5e-84 At1g78870 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.3 90.7 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
2.3 90.7 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
2.3 90.7 GSM436381 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436421 V. riparia (VR, PI588259) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436401 V. riparia (VR, PI588259) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436358 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436361 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
2.0 88.2 GSM436402 V. riparia (VR, PI588259) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM436404 V. riparia (VR, PI588259) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 4e-4 44 1614103_at CF515571 hypothetical protein LOC100257061 - 2e-2 At3g12140 emsy N terminus domain-containing protein / ENT domain-containing protein C.G. S.X.
0.03 3e-1 34 1617772_at AY427082.1 - - 2e-2 At1g72890 disease resistance protein (TIR-NBS class), putative C.G. S.X.
0.03 3e-1 34 1613960_at AY427082.1 - - 2e-2 At1g72890 disease resistance protein (TIR-NBS class), putative C.G. S.X.
0.03 1e+0 32 1622732_at CF372633 hypothetical protein LOC100247887 - 3e-10 At5g60460 sec61beta family protein C.G. S.X.
0.02 5e+0 30 1621492_at CB978828 similar to 60S ribosomal protein L19 - 4e-66 At3g16780 60S ribosomal protein L19 (RPL19B) C.G. S.X.
0.02 5e+0 30 1620524_at CB970909 hypothetical protein LOC100251822 - 9e-2 At1g13195 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 5e+0 30 1617567_at CB003954 - - 4e-1 At3g12490 cysteine protease inhibitor, putative / cystatin, putative C.G. S.X.
0.03 5e+0 30 1617002_at CB971115 - - 1e+0 At1g06500 unknown protein C.G. S.X.
0.03 5e+0 30 1615810_at CF213881 hypothetical protein LOC100256278 - 4e+0 At5g05250 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e+0 32 Arabidopsis thaliana At4g15020 827161 DNA binding / protein dimerization F:protein dimerization activity, DNA binding;P:biological_process unknown;C:cellular_component unknown;POM - - - C.G. S.X.
0.06 4e-1 36 Glycine max Gma.4995.1.S1_at BI970336 - - 3e+0 At1g10780 F-box family protein C.G. S.X.
0.13 3e-9 61 Hordeum vulgare HD06G11r_at HD06G11r - - 9e-1 At4g19620 unknown protein C.G. S.X.
0.06 7e-13 75 Oryza sativa Os08g0328300 AK105392.1 - ENT domain containing protein 1e-9 At5g13020 emsy N terminus domain-containing protein / ENT domain-containing protein C.G. S.X.
0.25 1e-28 127 Populus trichocarpa Ptp.2990.1.A1_at BP931580 hypothetical protein - 1e+0 At5g67040 unknown protein C.G. S.X.
0.06 1e-6 54 Triticum aestivum Ta.3009.1.S1_at BQ170386 - - 2e-2 At3g12140 emsy N terminus domain-containing protein / ENT domain-containing protein C.G. S.X.
0.04 5e-1 34 Zea mays Zm.4884.1.A1_at AY110577.1 R-interacting factor 1 - 1e-1 At4g03120 proline-rich family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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