Gene omics information

Query gene ID 1608603_at
Gene name hypothetical LOC100242108
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.91608603_atBQ795705hypothetical LOC100242108-3e-13At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)S.X.H.G.
0.4464.11609100_s_atCF205280.1--4e+0At5g06910ATJ6 (Arabidopsis J-domain protein 6)S.X.H.G.
0.4057.71610752_atCF209288hypothetical protein LOC100246682-1e-17At3g18030ATHAL3AS.X.H.G.
0.3954.91607757_atCF373709--1e-3At1g80670transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.3548.51614452_atBQ798156--6e-3At2g05900SDG11 (SET DOMAIN-CONTAINING PROTEIN 11)S.X.H.G.
0.3548.51613377_atCB910700hypothetical protein LOC100243326-4e+0At3g09350armadillo/beta-catenin repeat family proteinS.X.H.G.
0.3446.81621430_atBQ795297hypothetical protein LOC100249442-2e-30At5g18940Mo25 family proteinS.X.H.G.
0.2632.01613421_atCD711287hypothetical protein LOC100261079-2e-4At4g32400SHS1 (SODIUM HYPERSENSITIVE 1)S.X.H.G.
0.2632.01612852_atCB976927hypothetical protein LOC100243284-5e-76At5g62890permease, putativeS.X.H.G.
0.2428.71622171_atCB975783hypothetical protein LOC100244384-6e-28At5g6067060S ribosomal protein L12 (RPL12C)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.998.6GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
5.098.0GSM436378Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
5.098.0GSM436377Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
4.597.5GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.497.3GSM436352Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.497.3GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.497.3GSM436359Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
4.397.2GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.397.2GSM436358Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.397.2GSM436353Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.193e-231071615753_atCF207576--2e-11At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.121e-221051612281_atCF208454hypothetical protein LOC100260786-8e-13At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.084e-19931621563_x_atAF239740.1similar to caffeic acid O-methyltransferase-1e-39At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.084e-19931616434_s_atAF239740.1hypothetical protein LOC100258977 /// caffeic acid O-methyltransferase /// similar to caffeic acid O-methyltransferase-1e-39At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.084e-19931612124_atAF239740.1similar to caffeic acid O-methyltransferase-1e-39At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.121e-16851619682_x_atCF205002.1--3e-45At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.092e-12711619450_s_atCF215109hypothetical protein LOC100258977-6e-63At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.048e-2361620342_atCF207053.1O-methyltransferase-like-3e-5At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.028e-2361610458_atCA815967hypothetical protein LOC100257623-2e+0At5g05420immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.103e-1375Arabidopsis thalianaAt5g54160835504ATOMT1 (O-METHYLTRANSFERASE 1)A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase---C.G.S.X.
0.198e-21101Glycine maxGma.6550.3.S1_s_atAW234450--1e-33At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.089e-959Hordeum vulgareContig2535_s_atContig2535--3e-1At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.035e-136Oryza sativaOs12g01995009640.m00915--3e+0At3g47920unknown proteinC.G.S.X.
0.153e-550Populus trichocarpaPtpAffx.57723.1.S1_s_atAJ774023caffeic acid 3-O-methyltransferase-2e-39At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.053e-136Triticum aestivumTa.4350.1.A1_atCA644429Flavonoid O-methyltransferase-2e+1At4g08867unknown proteinC.G.S.X.
0.048e-340Zea maysZm.2681.1.A1_atBM073609--5e+0At5g42990UBC18 (ubiquitin-conjugating enzyme 18)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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