Gene omics information

Query gene ID 1608587_at
Gene name hypothetical protein LOC100248850
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8093.61608587_atCD799705hypothetical protein LOC100248850-9e-21At5g66210CPK28S.X.H.G.
0.3650.71621655_atCA817336hypothetical protein LOC100243738-3e-2At5g51670unknown proteinS.X.H.G.
0.3345.71622425_atCB971457similar to TIP1 (TIP GROWTH DEFECTIVE 1)-2e-5At5g20350TIP1 (TIP GROWTH DEFECTIVE 1)S.X.H.G.
0.1515.61621841_atBQ796797hypothetical protein LOC100258708-9e-3Atcg01000-S.X.H.G.
0.1313.31619905_atCF404235hypothetical protein LOC100263242-2e-1At2g34160nucleic acid bindingS.X.H.G.
0.077.81619154_atCF212140hypothetical protein LOC100246237-1e-7At4g25770unknown proteinS.X.H.G.
0.066.81621035_atCB006610hypothetical protein LOC100249467-4e-18At1g04210leucine-rich repeat family protein / protein kinase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.096.7GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.696.0GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
3.595.7GSM436406V. riparia (VR, PI588259) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
3.294.9GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.194.6GSM436370Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
3.194.6GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46
3.194.6GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64
2.491.3GSM436412V. riparia (VR, PI588259) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.390.7GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.289.9GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+0321622816_atCD719719--6e-9Atcg00500-C.G.S.X.
0.022e+0321610156_atCD719719--6e-9Atcg00500-C.G.S.X.
0.022e+0321608729_atCA816224--7e-2At4g27040VPS22C.G.S.X.
0.038e+0301620429_atAY427141.1--1e-9At5g63710leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.028e+0301620074_atCD713563hypothetical protein LOC100244152-2e-39At3g22930calmodulin, putativeC.G.S.X.
0.018e+0301619909_atCF215233S-adenosylmethionine synthetase 3-1e-159At2g36880MAT3 (methionine adenosyltransferase 3)C.G.S.X.
0.028e+0301619587_atCF200656.1--1e-9At4g3386540S ribosomal protein S29 (RPS29C)C.G.S.X.
0.028e+0301619473_atCF415678--2e-13At1g06515unknown proteinC.G.S.X.
0.018e+0301618262_atCF207578hypothetical protein LOC100255430-5e-66At5g65110ACX2 (ACYL-COA OXIDASE 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.209e-21101Arabidopsis thalianaAt5g66210836753CPK28member of Calcium Dependent Protein Kinase---C.G.S.X.
0.331e-36155Glycine maxGmaAffx.23909.1.S1_atBU549105--2e-18At5g66210CPK28C.G.S.X.
0.136e-548Hordeum vulgareContig11154_atContig11154--1e-15At5g66210CPK28C.G.S.X.
0.074e-344Oryza sativaOs02g0126400AF194413.1-Protein kinase CPK16e-30At2g17890CPK16C.G.S.X.
0.361e-66254Populus trichocarpaPtpAffx.146636.1.A1_atCV268823calcium dependent protein kinase 16-9e-15At5g66210CPK28C.G.S.X.
0.073e-240Triticum aestivumTaAffx.71016.1.A1_atBE424472--1e+0At3g22930calmodulin, putativeC.G.S.X.
0.021e+130Zea maysZmAffx.1158.1.S1_atAW438209--3e+0At5g37475translation initiation factor-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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