CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1608579_at

Gene name hypothetical protein LOC100245274

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1608579_at CF515265 hypothetical protein LOC100245274 - 2e+0 At5g60290 unknown protein S.X. H.G.
0.44 64.1 1621966_at CD801280 hypothetical protein LOC100245849 - 4e+0 At1g20470 auxin-responsive family protein S.X. H.G.
0.29 37.7 1607228_at CF515176 hypothetical protein LOC100245274 - 1e-1 At3g21560 UGT84A2 S.X. H.G.
0.08 8.5 1612444_at CF214623 hypothetical protein LOC100262819 - 7e-3 At1g70890 MLP43 (MLP-LIKE PROTEIN 43) S.X. H.G.
0.03 4.2 1615174_s_at CD011073 leucoanthocyanidin reductase 2 - 8e+0 At5g38080 unknown protein S.X. H.G.
0.01 2.1 1608133_at CA809505 hypothetical protein LOC100244452 - 1e-33 At5g59370 ACT4 (ACTIN 4) S.X. H.G.
0.01 2.1 1606765_at CD715653 hypothetical protein LOC100245849 - 4e-10 At1g13700 glucosamine/galactosamine-6-phosphate isomerase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.5 98.9 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
6.5 98.9 GSM147676 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 5
5.0 98.0 GSM436415 V. riparia (VR, PI588259) SD, 13h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.9 97.9 GSM436399 V. riparia (VR, PI588259) LD, 15h 14 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.6 97.6 GSM436397 V. riparia (VR, PI588259) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.6 97.6 GSM147682 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 11
4.2 97.1 GSM436416 V. riparia (VR, PI588259) SD, 13h 7 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.8 96.4 GSM436394 V. riparia (VR, PI588259) LD, 15h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436395 V. riparia (VR, PI588259) LD, 15h 7 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436396 V. riparia (VR, PI588259) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.42 1e-134 478 1617078_at CD714471 hypothetical protein LOC100247052 - 3e-1 At1g10140 - C.G. S.X.
0.10 3e-49 194 1607228_at CF515176 hypothetical protein LOC100245274 - 1e-1 At3g21560 UGT84A2 C.G. S.X.
0.03 2e-10 65 1619057_at CD799697 hypothetical protein LOC100252925 - 1e-17 At1g56700 pyrrolidone-carboxylate peptidase family protein C.G. S.X.
0.03 7e-10 63 1621447_s_at CF404909 hypothetical protein LOC100261458 - 1e-85 At3g26340 20S proteasome beta subunit E, putative C.G. S.X.
0.04 7e-10 63 1621230_at CF605781 hypothetical protein LOC100243742 - 4e-1 At2g17880 DNAJ heat shock protein, putative C.G. S.X.
0.04 7e-10 63 1620931_at CB915389 hypothetical LOC100243703 - 2e-2 At3g55940 phosphoinositide-specific phospholipase C, putative C.G. S.X.
0.03 7e-10 63 1612226_at CB974061 hypothetical protein LOC100259151 - 1e-29 At1g22280 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.04 7e-10 63 1608620_at CF605781 - - 4e-1 At2g17880 DNAJ heat shock protein, putative C.G. S.X.
0.04 7e-10 63 1608339_at CB915389 - - 2e-2 At3g55940 phosphoinositide-specific phospholipase C, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At5g60290 836151 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown - - - C.G. S.X.
0.02 7e-1 36 Glycine max HgAffx.16054.1.S1_at CB376271 - - 2e-1 At1g75550 glycine-rich protein C.G. S.X.
0.05 4e-9 61 Hordeum vulgare Contig17260_at Contig17260 - - 4e-1 At2g18530 protein kinase family protein C.G. S.X.
0.04 2e-8 61 Oryza sativa Os02g0188000 AK105236.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 5e-2 At2g23250 UGT84B2 (UDP-glucosyl transferase 84B2) C.G. S.X.
0.17 1e-5 52 Populus trichocarpa PtpAffx.18005.2.A1_at CV283422 - - 1e-1 At4g15260 UDP-glucoronosyl/UDP-glucosyl transferase family protein C.G. S.X.
0.04 1e-4 48 Triticum aestivum Ta.12649.1.S1_at BQ171952 - - 2e+1 Atmg00980 - C.G. S.X.
0.02 2e-1 36 Zea mays Zm.9710.1.S1_at CF624968 hypothetical protein LOC100276125 - 4e+0 At3g04640 glycine-rich protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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