Gene omics information

Query gene ID	1608451_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.38	53.6	1608451_at	CF205526.1	-	-	5e-22	At3g25220	FKBP15-1	S.X.	H.G.	Please select
0.73	90.8	1607300_at	CF206446.1	-	-	9e-51	At2g47650	UXS4 (UDP-XYLOSE SYNTHASE 4)	S.X.	H.G.	Please select
0.67	87.9	1609341_s_at	CF202467.1	hypothetical protein LOC100265359	-	2e-3	At5g40630	ubiquitin family protein	S.X.	H.G.	Please select
0.61	83.2	1618973_s_at	CF204369.1	hypothetical protein LOC100267103	-	1e+0	At3g61560	reticulon family protein (RTNLB6)	S.X.	H.G.	Please select
0.60	81.9	1620264_x_at	CF201907.1	-	-	2e-1	At5g10860	CBS domain-containing protein	S.X.	H.G.	Please select
0.44	64.1	1621187_s_at	CF201896.1	-	-	8e+0	At5g50345	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.2	99.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
8.5	99.4	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
8.4	99.4	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
8.1	99.4	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
7.6	99.3	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
7.5	99.2	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
7.3	99.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
7.1	99.1	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
6.9	99.1	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
6.7	99.0	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.87	0	1197	1608663_s_at	CB036095	hypothetical protein LOC100245185	-	5e-19	At3g25220	FKBP15-1	C.G.	S.X.	Please select
0.02	4e-1	34	1617443_at	CD013741	-	-	3e-9	At5g06790	unknown protein	C.G.	S.X.	Please select
0.02	4e-1	34	1613629_at	CD013741	-	-	3e-9	At5g06790	unknown protein	C.G.	S.X.	Please select
0.02	4e-1	34	1612680_at	BM437446	-	-	3e-27	At1g64680	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	34	1610269_at	CA816861	hypothetical protein LOC100253844	-	4e+0	At4g39890	AtRABH1c (Arabidopsis Rab GTPase homolog H1c)	C.G.	S.X.	Please select
0.03	4e-1	34	1610036_at	CA815147	hypothetical protein LOC100244789	-	7e-2	At3g62330	zinc knuckle (CCHC-type) family protein	C.G.	S.X.	Please select
0.03	4e-1	34	1609585_at	CF513261	-	-	9e-1	At3g59690	IQD13 (IQ-domain 13)	C.G.	S.X.	Please select
0.02	4e-1	34	1608908_at	BM437446	hypothetical protein LOC100256431	-	3e-27	At1g64680	unknown protein	C.G.	S.X.	Please select
0.02	4e-1	34	1607802_at	CF516547	-	-	6e+0	At5g25300	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.48	5e-22	105	Arabidopsis thaliana	At3g25220	822115	FKBP15-1	immunophilin (FKBP15-1)	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.36	2e-53	210	Glycine max	Gma.2478.1.S1_at	CF921737	-	-	8e-18	At5g48580	FKBP15-2	C.G.	S.X.	Please select
0.28	2e-23	109	Hordeum vulgare	Contig4204_at	Contig4204	-	-	1e-4	At5g48580	FKBP15-2	C.G.	S.X.	Please select
0.33	9e-19	95	Oryza sativa	Os.11022.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.35	7e-65	248	Populus trichocarpa	Ptp.1416.1.A1_s_at	CV247793	hypothetical protein	-	2e-34	At5g48580	FKBP15-2	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.27	1e-28	127	Triticum aestivum	Ta.1087.1.S1_s_at	CK169309	-	-	3e-5	At3g25220	FKBP15-1	C.G.	S.X.	Please select
0.30	2e-25	115	Zea mays	Zm.7086.1.S1_at	AY105607.1	FK506-binding protein 2-1	-	3e-17	At3g25220	FKBP15-1	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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