CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1608397_at

Gene name hypothetical protein LOC100250547

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1608397_at CB971352 hypothetical protein LOC100250547 - 4e+0 At3g26420 ATRZ-1A S.X. H.G.
0.91 98.8 1614812_s_at CF372270 hypothetical protein LOC100265283 - 2e-27 At3g02580 STE1 (STEROL 1) S.X. H.G.
0.67 87.9 1610957_at CF207187 hypothetical protein LOC100241474 - 4e+0 At4g09320 NDPK1 S.X. H.G.
0.60 81.9 1622345_at CB970837 hypothetical protein LOC100266705 - 3e-14 At1g73050 (R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative S.X. H.G.
0.57 79.8 1606948_at CF404230 hypothetical protein LOC100266705 - 2e-2 At1g74530 unknown protein S.X. H.G.
0.30 39.4 1613602_at CF513870 hypothetical LOC100254354 - 8e+0 At5g02470 DPA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.9 99.6 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
7.7 99.3 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
6.2 98.8 GSM147712 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 41
5.9 98.6 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
5.1 98.1 GSM147724 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 53
4.9 97.9 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
4.7 97.7 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
4.6 97.6 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
4.6 97.6 GSM147738 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 67
4.5 97.5 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 32 1620704_at CF404231 hypothetical protein LOC100243493 - 1e+0 At4g28730 glutaredoxin family protein C.G. S.X.
0.02 5e+0 30 1622100_at BM436534 hypothetical protein LOC100267831 - 5e-7 At2g46690 auxin-responsive family protein C.G. S.X.
0.03 5e+0 30 1621092_at CF210623 hypothetical protein LOC100256288 - 5e+0 Atcg01080 - C.G. S.X.
0.03 5e+0 30 1620913_at CF373825 - - 3e+0 At5g16486 - C.G. S.X.
0.02 5e+0 30 1620640_s_at CA809468 hypothetical protein LOC100267834 - 9e-9 At4g24590 unknown protein C.G. S.X.
0.02 5e+0 30 1619325_at CF211836 hypothetical protein LOC100263459 - 6e-4 At3g14660 CYP72A13 C.G. S.X.
0.02 5e+0 30 1618091_s_at CB973873 hypothetical protein LOC100255026 - 6e-3 At3g17020 universal stress protein (USP) family protein C.G. S.X.
0.03 5e+0 30 1617826_s_at CF211169 hypothetical protein LOC100250334 - 2e-2 At1g75560 zinc knuckle (CCHC-type) family protein C.G. S.X.
0.02 5e+0 30 1617403_at CF208495 - - 8e+0 At5g60810 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At3g26420 822246 ATRZ-1A Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance. - - - C.G. S.X.
0.04 1e+0 34 Glycine max HgAffx.17599.1.S1_at CB278791 - - 4e+0 At3g03480 CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase) C.G. S.X.
0.04 2e+0 32 Hordeum vulgare Contig19506_at Contig19506 - - 1e-3 At5g27880 zinc finger (C2H2 type) family protein C.G. S.X.
0.04 2e+0 34 Oryza sativa Os06g0535601 9634.m03251 - - 4e+0 At5g61228 CPuORF15 (Conserved peptide upstream open reading frame 15) C.G. S.X.
0.04 5e+0 32 Populus trichocarpa PtpAffx.224068.1.S1_at pmrna42305 hypothetical protein - 3e+0 At1g18800 NRP2 (NAP1-RELATED PROTEIN 2) C.G. S.X.
0.04 1e+0 34 Triticum aestivum TaAffx.86359.1.S1_at CA610353 - - 3e+0 At3g23727 SCRL12 (SCR-Like 12) C.G. S.X.
0.03 2e+0 32 Zea mays ZmAffx.1345.1.S1_s_at 40794996-40 - - 9e-41 Atmg01330 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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