Gene omics information

Query gene ID	1608307_at
Gene name	hypothetical protein LOC100247674
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	84.3	1608307_at	CF209143	hypothetical protein LOC100247674	-	2e-1	At2g33300	-	S.X.	H.G.	Please select
0.48	68.8	1611698_at	CA812037	hypothetical protein LOC100263780	-	2e+0	At5g65360	histone H3	S.X.	H.G.	Please select
0.22	25.6	1617131_at	CF511594	hypothetical protein LOC100242326	-	2e+0	At1g54095	unknown protein	S.X.	H.G.	Please select
0.22	25.6	1612201_at	CF404051	hypothetical protein LOC100266189	-	7e-5	At4g32551	LUG (LEUNIG)	S.X.	H.G.	Please select
0.22	25.6	1611343_at	CB974830	hypothetical protein LOC100261168	-	6e+0	At3g15210	ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)	S.X.	H.G.	Please select
0.15	15.6	1608358_at	CD004170	hypothetical protein LOC100266977	-	9e-27	At4g27585	band 7 family protein	S.X.	H.G.	Please select
0.14	14.4	1608374_at	CF214105	-	-	3e-1	At4g03153	kinase interacting family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.9	93.8	GSM436392	V. riparia (VR, PI588259) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436391	V. riparia (VR, PI588259) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.6	92.5	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
2.5	91.9	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.5	91.9	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
2.5	91.9	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.5	91.9	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.4	91.3	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.21	1e-9	61	1619842_s_at	BQ793715	hypothetical protein LOC100244132	-	1e+0	At5g08220	unknown protein	C.G.	S.X.	Please select
0.10	1e-9	61	1616570_at	CF568974	-	-	1e+0	At5g08220	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	34	1621688_at	CF415096	hypothetical protein LOC100261754	-	8e-10	At5g41080	glycerophosphoryl diester phosphodiesterase family protein	C.G.	S.X.	Please select
0.01	1e+0	32	1608966_at	CB982651	hypothetical protein LOC100256404	-	2e-4	At5g59550	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.02	1e+0	32	1607952_at	CF372631	hypothetical protein LOC100250523	-	3e-8	At1g28440	HSL1 (HAESA-Like 1)	C.G.	S.X.	Please select
0.02	5e+0	30	1622564_at	BM437316	hypothetical protein LOC100260573	-	1e-35	At1g58684	40S ribosomal protein S2, putative	C.G.	S.X.	Please select
0.03	5e+0	30	1617966_at	CF516835	-	-	4e+0	At5g01610	unknown protein	C.G.	S.X.	Please select
0.03	5e+0	30	1616773_at	CB342378	hypothetical protein LOC100243945	-	1e-15	At5g61240	protein binding	C.G.	S.X.	Please select
0.04	5e+0	30	1616769_at	AY427200.1	-	-	2e+0	At2g47880	glutaredoxin family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-1	36	Arabidopsis thaliana	At2g33300	817893	-	F:molecular_function unknown;P:transcription;C:nucleus;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-4	46	Glycine max	Gma.5748.1.S1_at	BU761120	-	-	1e-63	At5g64813	LIP1 (Light Insensitive Period1)	C.G.	S.X.	Please select
0.04	2e+0	32	Hordeum vulgare	HB19M13r_s_at	HB19M13r	-	-	1e-3	At4g33540	metallo-beta-lactamase family protein	C.G.	S.X.	Please select
0.04	5e-1	36	Oryza sativa	Os07g0179900	9635.m00776	-	-	9e-1	At5g02960	40S ribosomal protein S23 (RPS23B)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	9e-2	38	Populus trichocarpa	PtpAffx.125941.1.A1_at	BP929833	hypothetical protein	-	4e+0	At4g35025	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	32	Triticum aestivum	TaAffx.84475.1.S1_at	CA636111	-	-	1e+0	At5g35540	unknown protein	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	Zm.6028.1.A1_at	AI665247	-	-	4e+0	At1g71780	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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