Gene omics information

Query gene ID 1608231_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.91608231_atCB979713--1e+0At4g02620vacuolar ATPase subunit F family proteinS.X.H.G.
0.3141.31608931_atCD799025similar to AO (L-ASPARTATE OXIDASE); L-aspartate oxidase-1e+1At5g41390-S.X.H.G.
0.2937.71619222_atCF215786--4e-1At5g39540-S.X.H.G.
0.2632.01618763_atCF609703hypothetical protein LOC100257331-3e-2At1g75388CPuORF5 (Conserved peptide upstream open reading frame 5)S.X.H.G.
0.2428.71607634_atCF204724.1--2e-9At5g65660hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.2225.61610613_atCF405805hypothetical protein LOC100243271-2e-27At1g03475LIN2 (LESION INITIATION 2)S.X.H.G.
0.2124.01619201_atCF404561Myb-related TRIPTYCHON-like protein-4e-28At5g53200TRY (TRIPTYCHON)S.X.H.G.
0.2022.41614388_atCF210132hypothetical protein LOC100241529-2e-1At2g21610pectinesterase family proteinS.X.H.G.
0.1819.41611842_atCB969887hypothetical protein LOC100267889-5e-27At2g25737unknown proteinS.X.H.G.
0.1819.41615486_atCF415476hypothetical protein LOC100245706-7e-3At5g15410DND1 (DEFENSE NO DEATH 1)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
32.0100.0GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
13.799.8GSM299451B_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
12.999.8GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
7.299.1GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
7.199.1GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.498.9GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10
6.098.7GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56
4.897.8GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61
4.297.1GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38
4.196.9GSM147714Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation43
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-1341607694_atCF405458--8e+0At5g55320membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-relatedC.G.S.X.
0.023e-1341607585_atCF403358hypothetical protein LOC100267799-7e+0At5g09820plastid-lipid associated protein PAP / fibrillin family proteinC.G.S.X.
0.021e+0321621771_atCB34852240S ribosomal protein SA-1e-110At1g72370P40C.G.S.X.
0.031e+0321618272_atCK136958.1--1e+0At4g07950DNA-directed RNA polymerase III family proteinC.G.S.X.
0.021e+0321614577_atCF373217hypothetical protein LOC100265381-1e-16At1g23750DNA-binding protein-relatedC.G.S.X.
0.021e+0321614332_s_atCA814568hypothetical protein LOC100265533-4e-4At2g28710zinc finger (C2H2 type) family proteinC.G.S.X.
0.031e+0321608821_atCF373423hypothetical protein LOC100259588-1e+0At4g23670major latex protein-related / MLP-relatedC.G.S.X.
0.031e+0321607349_atCF516800hypothetical protein LOC100263112-6e-2At4g35530phosphatidylinositolglycan-relatedC.G.S.X.
0.035e+0301621839_atCD715518--5e+0At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Arabidopsis thalianaAt4g02620828221vacuolar ATPase subunit F family proteinF:hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:plasma membrane, vacuole;MFOPA---C.G.S.X.
0.061e+034Glycine maxGmaAffx.57848.1.A1_atBU547166--2e+0At4g12100ubiquitin protein ligase bindingC.G.S.X.
0.048e+030Hordeum vulgareHVSMEb0006M02r2_s_atHVSMEb0006M02r2--6e-1At3g22930calmodulin, putativeC.G.S.X.
0.042e+034Oryza sativaOs10g0150400CF308064-Protein of unknown function DUF1210 family protein2e+0At5g14340AtMYB40 (myb domain protein 40)C.G.S.X.
0.055e+032Populus trichocarpaPtpAffx.217609.1.S1_s_atpmrna32945hypothetical protein-1e+0At3g21730dihydroneopterin aldolase family proteinC.G.S.X.
0.041e+034Triticum aestivumTaAffx.110700.4.A1_atCA638753--1e+0At3g01175-C.G.S.X.
0.031e-136Zea maysZm.1454.1.A1_atBG841866--4e-1At3g63170chalcone isomeraseC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage