Gene omics information

Query gene ID	1608164_at
Gene name	hypothetical protein LOC100261109
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.59	80.6	1608164_at	CD008061	hypothetical protein LOC100261109	-	3e-4	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	S.X.	H.G.	Please select
0.60	81.9	1613042_at	CB346341	hypothetical protein LOC100249611	-	2e-3	At3g46230	ATHSP17.4	S.X.	H.G.	Please select
0.46	66.5	1614330_at	CB343702	hypothetical protein LOC100243983	-	3e-5	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	S.X.	H.G.	Please select
0.43	61.5	1610032_at	CF405330	hypothetical protein LOC100266315	-	1e-4	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	S.X.	H.G.	Please select
0.43	61.5	1622489_at	BM436450	hypothetical protein LOC100254799	-	1e+0	At5g37670	15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)	S.X.	H.G.	Please select
0.33	45.7	1616145_a_at	BQ794473	hypothetical protein LOC100261583	-	1e-3	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	S.X.	H.G.	Please select
0.14	14.4	1607291_at	CB007647	hypothetical protein LOC100265661	-	2e-134	At5g52640	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
49.2	100.0	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
33.9	100.0	GSM436357	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
18.5	99.9	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
17.9	99.9	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
14.8	99.9	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
7.0	99.1	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.7	98.5	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.6	97.6	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.56	3e-159	559	1611192_at	CB348409	hypothetical protein LOC100268056	-	5e-10	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.59	1e-155	547	1611052_at	CD718520	-	-	4e-7	At5g12030	AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)	C.G.	S.X.	Please select
0.58	3e-153	539	1610032_at	CF405330	hypothetical protein LOC100266315	-	1e-4	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.47	1e-142	504	1614330_at	CB343702	hypothetical protein LOC100243983	-	3e-5	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.42	1e-133	474	1622173_at	CD719685	-	-	3e-6	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.42	1e-133	474	1618391_at	CD719685	-	-	3e-6	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.02	2e+0	32	1621840_at	CB036000	-	-	4e-7	At1g64890	integral membrane transporter family protein	C.G.	S.X.	Please select
0.01	2e+0	32	1620224_at	CF515298	hypothetical protein LOC100261667	-	2e-10	At3g25290	auxin-responsive family protein	C.G.	S.X.	Please select
0.02	2e+0	32	1618056_at	BM437711	hypothetical protein LOC100240796	-	4e-7	At1g64890	integral membrane transporter family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.25	3e-4	46	Arabidopsis thaliana	At5g12020	831075	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.35	8e-9	61	Glycine max	Gma.10763.1.S1_at	AW567704	-	-	2e-6	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select
0.14	5e-14	77	Hordeum vulgare	Contig3285_at	Contig3285	-	-	4e-1	At2g40240	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.07	2e-16	87	Oryza sativa	Os01g0184100	AK071240.1	-	17.5 kDa class II heat shock protein	4e-1	At5g22270	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.34	1e-41	171	Populus trichocarpa	PtpAffx.491.1.S1_s_at	CV246284	hypothetical protein	-	2e-6	At5g12030	AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.15	2e-11	69	Triticum aestivum	TaAffx.70660.1.S1_at	BQ802102	-	-	6e+0	At3g15780	unknown protein	C.G.	S.X.	Please select
0.13	7e-13	73	Zea mays	Zm.16504.1.A1_at	X54076.1	heat shock protein18f	-	3e+1	At5g04030	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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