Gene omics information

Query gene ID	1608103_at
Gene name	hypothetical protein LOC100266523
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	83.2	1608103_at	CD801640	hypothetical protein LOC100266523	-	3e-61	At2g47060	serine/threonine protein kinase, putative	S.X.	H.G.	Please select
0.71	89.5	1609434_at	CF211782	hypothetical protein LOC100240790	-	1e-41	At3g42050	vacuolar ATP synthase subunit H family protein	S.X.	H.G.	Please select
0.48	68.8	1620593_at	BQ797219	hypothetical protein LOC100252659	-	1e-97	At1g30580	GTP binding	S.X.	H.G.	Please select
0.47	67.7	1614631_at	CB979660	hypothetical protein LOC100254376	-	1e-137	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	S.X.	H.G.	Please select
0.40	57.7	1616080_at	CF511120	hypothetical protein LOC100254062	-	5e-13	At5g42970	COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)	S.X.	H.G.	Please select
0.25	30.5	1620819_at	BQ797308	hypothetical protein LOC100244100	-	1e-135	At1g54270	EIF4A-2	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.0	94.2	GSM287884	Green soft berry C7 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287871	Green hard berry C4 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287887	Green soft berry C23 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.18	6e-41	167	1607382_at	CF404494	hypothetical protein LOC100265884	-	5e-18	At3g62220	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.22	7e-13	73	1615460_at	CF405945	hypothetical protein LOC100249750	-	2e-91	At1g06700	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.04	3e-6	52	1619614_at	CF372273	hypothetical protein LOC100249831	-	2e-36	At3g14350	SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)	C.G.	S.X.	Please select
0.04	2e-4	46	1609753_at	CB978481	hypothetical protein LOC100240962	-	1e-29	At1g67720	leucine-rich repeat family protein / protein kinase family protein	C.G.	S.X.	Please select
0.03	3e-3	42	1619555_at	AY395743.1	hypothetical protein LOC100250154	-	3e-61	At5g02800	protein kinase family protein	C.G.	S.X.	Please select
0.03	3e-3	42	1610364_at	BM437363	hypothetical protein LOC100256105	-	4e-10	At5g15080	protein kinase, putative	C.G.	S.X.	Please select
0.03	3e-3	42	1607524_at	CF372095	similar to receptor-like protein kinase 2	-	2e-19	At5g65700	BAM1 (BARELY ANY MERISTEM 1)	C.G.	S.X.	Please select
0.03	3e-3	42	1606567_at	BM437363	-	-	4e-10	At5g15080	protein kinase, putative	C.G.	S.X.	Please select
0.03	1e-2	40	1621082_a_at	CF516167	hypothetical protein LOC100262185	-	3e-13	At5g02800	protein kinase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.53	3e-61	236	Arabidopsis thaliana	At2g47060	819320	serine/threonine protein kinase, putative	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.46	3e-136	486	Glycine max	Gma.11041.1.S1_at	BI970555	-	-	1e-79	At2g47060	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.42	4e-65	248	Hordeum vulgare	Contig5016_at	Contig5016	-	-	1e-30	At2g47060	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.44	4e-77	289	Oryza sativa	Os05g0135800	AK066258.1	-	Pto kinase interactor 1	2e-66	At3g62220	serine/threonine protein kinase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.50	4e-101	369	Populus trichocarpa	PtpAffx.208424.1.S1_at	pmrna16740	hypothetical protein	-	4e-57	At3g17410	serine/threonine protein kinase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.29	8e-31	135	Triticum aestivum	Ta.7365.2.S1_a_at	CA622058	-	-	6e-26	At3g17410	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.37	1e-21	103	Zea mays	Zm.16839.1.A1_at	CF630748	pto kinase interactor 1	-	3e-45	At3g62220	serine/threonine protein kinase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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